Gene : Medtr5g053250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10106:SF20 - TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED Description:  eukaryotic cytochrome b561 protein
Genomic Order:  2913 Name:  ? Medtr5g053250
Secondary Identifier:  ? PAC:31091347
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g053250 0.5kb upstream 0.5kb upstream 3640 true chr5: 21943645-21947284 Medicago truncatula
Medtr5g053250 0.5kb upstream 0.5kb upstream 500 false chr5: 21943645-21944144 Medicago truncatula
Medtr5g053250 0.5kb downstream 0.5kb downstream 3640 true chr5: 21944145-21947784 Medicago truncatula
Medtr5g053250 0.5kb downstream 0.5kb downstream 500 false chr5: 21947285-21947784 Medicago truncatula
Medtr5g053250 1.0kb upstream 1.0kb upstream 4140 true chr5: 21943145-21947284 Medicago truncatula
Medtr5g053250 1.0kb upstream 1.0kb upstream 1000 false chr5: 21943145-21944144 Medicago truncatula
Medtr5g053250 1.0kb downstream 1.0kb downstream 4140 true chr5: 21944145-21948284 Medicago truncatula
Medtr5g053250 1.0kb downstream 1.0kb downstream 1000 false chr5: 21947285-21948284 Medicago truncatula
Medtr5g053250 2.0kb upstream 2.0kb upstream 5140 true chr5: 21942145-21947284 Medicago truncatula
Medtr5g053250 2.0kb upstream 2.0kb upstream 2000 false chr5: 21942145-21944144 Medicago truncatula
Medtr5g053250 2.0kb downstream 2.0kb downstream 5140 true chr5: 21944145-21949284 Medicago truncatula
Medtr5g053250 2.0kb downstream 2.0kb downstream 2000 false chr5: 21947285-21949284 Medicago truncatula
Medtr5g053250 5.0kb upstream 5.0kb upstream 8140 true chr5: 21939145-21947284 Medicago truncatula
Medtr5g053250 5.0kb upstream 5.0kb upstream 5000 false chr5: 21939145-21944144 Medicago truncatula
Medtr5g053250 5.0kb downstream 5.0kb downstream 8140 true chr5: 21944145-21952284 Medicago truncatula
Medtr5g053250 5.0kb downstream 5.0kb downstream 5000 false chr5: 21947285-21952284 Medicago truncatula
Medtr5g053250 10.0kb upstream 10.0kb upstream 13140 true chr5: 21934145-21947284 Medicago truncatula
Medtr5g053250 10.0kb upstream 10.0kb upstream 10000 false chr5: 21934145-21944144 Medicago truncatula
Medtr5g053250 10.0kb downstream 10.0kb downstream 13140 true chr5: 21944145-21957284 Medicago truncatula
Medtr5g053250 10.0kb downstream 10.0kb downstream 10000 false chr5: 21947285-21957284 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791770 5273 Angiosperm View MSA
122299146 5265 Fabidae View MSA
124068772 5270 Rosid View MSA
123739569 5271 Pentapetalae View MSA
122791554 5272 Eudicot View MSA
123429174 5275 Viridiplantae View MSA
121352127 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119       Low
cufflinks 0.243        
cufflinks 0.121       Low
cufflinks 1.283       High
cufflinks 0.381        
cufflinks 0.448        
cufflinks 0.657        
cufflinks 0.163        
cufflinks 0.785        

0 Strain