Gene : Medtr5g053280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10803//PTHR10803:SF2 - ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  2916 Name:  ? Medtr5g053280
Secondary Identifier:  ? PAC:31089313
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g053280 0.5kb upstream 0.5kb upstream 4450 true chr5: 21968063-21972512 Medicago truncatula
Medtr5g053280 0.5kb upstream 0.5kb upstream 500 false chr5: 21972013-21972512 Medicago truncatula
Medtr5g053280 0.5kb downstream 0.5kb downstream 4450 true chr5: 21967563-21972012 Medicago truncatula
Medtr5g053280 0.5kb downstream 0.5kb downstream 500 false chr5: 21967563-21968062 Medicago truncatula
Medtr5g053280 1.0kb upstream 1.0kb upstream 4950 true chr5: 21968063-21973012 Medicago truncatula
Medtr5g053280 1.0kb upstream 1.0kb upstream 1000 false chr5: 21972013-21973012 Medicago truncatula
Medtr5g053280 1.0kb downstream 1.0kb downstream 4950 true chr5: 21967063-21972012 Medicago truncatula
Medtr5g053280 1.0kb downstream 1.0kb downstream 1000 false chr5: 21967063-21968062 Medicago truncatula
Medtr5g053280 2.0kb upstream 2.0kb upstream 5950 true chr5: 21968063-21974012 Medicago truncatula
Medtr5g053280 2.0kb upstream 2.0kb upstream 2000 false chr5: 21972013-21974012 Medicago truncatula
Medtr5g053280 2.0kb downstream 2.0kb downstream 5950 true chr5: 21966063-21972012 Medicago truncatula
Medtr5g053280 2.0kb downstream 2.0kb downstream 2000 false chr5: 21966063-21968062 Medicago truncatula
Medtr5g053280 5.0kb upstream 5.0kb upstream 8950 true chr5: 21968063-21977012 Medicago truncatula
Medtr5g053280 5.0kb upstream 5.0kb upstream 5000 false chr5: 21972013-21977012 Medicago truncatula
Medtr5g053280 5.0kb downstream 5.0kb downstream 8950 true chr5: 21963063-21972012 Medicago truncatula
Medtr5g053280 5.0kb downstream 5.0kb downstream 5000 false chr5: 21963063-21968062 Medicago truncatula
Medtr5g053280 10.0kb upstream 10.0kb upstream 13950 true chr5: 21968063-21982012 Medicago truncatula
Medtr5g053280 10.0kb upstream 10.0kb upstream 10000 false chr5: 21972013-21982012 Medicago truncatula
Medtr5g053280 10.0kb downstream 10.0kb downstream 13950 true chr5: 21958063-21972012 Medicago truncatula
Medtr5g053280 10.0kb downstream 10.0kb downstream 10000 false chr5: 21958063-21968062 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302580 5265 Fabidae View MSA
124074878 5270 Rosid View MSA
123743074 5271 Pentapetalae View MSA
122792393 5272 Eudicot View MSA
122045230 5273 Angiosperm View MSA
121344575 5274 Embryophyte View MSA
123380067 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.385        
cufflinks 3.436        
cufflinks 3.283        
cufflinks 0.169       Low
cufflinks 4.042       High
cufflinks 0.334        
cufflinks 0.278        
cufflinks 4.161       High
cufflinks 0.234        

0 Strain