Gene : Medtr5g049170 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR16219:SF1 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 4 Description:  SKIP interacting protein
Genomic Order:  2871 Name:  ? Medtr5g049170
Secondary Identifier:  ? PAC:31091912
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g049170 0.5kb upstream 0.5kb upstream 7285 true chr5: 21532326-21539610 Medicago truncatula
Medtr5g049170 0.5kb upstream 0.5kb upstream 500 false chr5: 21532326-21532825 Medicago truncatula
Medtr5g049170 0.5kb downstream 0.5kb downstream 7285 true chr5: 21532826-21540110 Medicago truncatula
Medtr5g049170 0.5kb downstream 0.5kb downstream 500 false chr5: 21539611-21540110 Medicago truncatula
Medtr5g049170 1.0kb upstream 1.0kb upstream 7785 true chr5: 21531826-21539610 Medicago truncatula
Medtr5g049170 1.0kb upstream 1.0kb upstream 1000 false chr5: 21531826-21532825 Medicago truncatula
Medtr5g049170 1.0kb downstream 1.0kb downstream 7785 true chr5: 21532826-21540610 Medicago truncatula
Medtr5g049170 1.0kb downstream 1.0kb downstream 1000 false chr5: 21539611-21540610 Medicago truncatula
Medtr5g049170 2.0kb upstream 2.0kb upstream 8785 true chr5: 21530826-21539610 Medicago truncatula
Medtr5g049170 2.0kb upstream 2.0kb upstream 2000 false chr5: 21530826-21532825 Medicago truncatula
Medtr5g049170 2.0kb downstream 2.0kb downstream 8785 true chr5: 21532826-21541610 Medicago truncatula
Medtr5g049170 2.0kb downstream 2.0kb downstream 2000 false chr5: 21539611-21541610 Medicago truncatula
Medtr5g049170 5.0kb upstream 5.0kb upstream 11785 true chr5: 21527826-21539610 Medicago truncatula
Medtr5g049170 5.0kb upstream 5.0kb upstream 5000 false chr5: 21527826-21532825 Medicago truncatula
Medtr5g049170 5.0kb downstream 5.0kb downstream 11785 true chr5: 21532826-21544610 Medicago truncatula
Medtr5g049170 5.0kb downstream 5.0kb downstream 5000 false chr5: 21539611-21544610 Medicago truncatula
Medtr5g049170 10.0kb upstream 10.0kb upstream 16785 true chr5: 21522826-21539610 Medicago truncatula
Medtr5g049170 10.0kb upstream 10.0kb upstream 10000 false chr5: 21522826-21532825 Medicago truncatula
Medtr5g049170 10.0kb downstream 10.0kb downstream 16785 true chr5: 21532826-21549610 Medicago truncatula
Medtr5g049170 10.0kb downstream 10.0kb downstream 10000 false chr5: 21539611-21549610 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042369 5273 Angiosperm View MSA
122305472 5265 Fabidae View MSA
124061631 5270 Rosid View MSA
123749615 5271 Pentapetalae View MSA
122789207 5272 Eudicot View MSA
121345524 5274 Embryophyte View MSA
123380233 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.072        
cufflinks 0.035     Low Low
cufflinks 0.066     Low  
cufflinks 0.074        
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.035     Low Low
cufflinks 0.122       High

0 Strain