Gene : Medtr5g055355 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  3008
Name:  ? Medtr5g055355 Secondary Identifier:  ? PAC:31087513
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g055355 0.5kb upstream 0.5kb upstream 821 true chr5: 22795882-22796702 Medicago truncatula
Medtr5g055355 0.5kb upstream 0.5kb upstream 500 false chr5: 22796203-22796702 Medicago truncatula
Medtr5g055355 0.5kb downstream 0.5kb downstream 821 true chr5: 22795382-22796202 Medicago truncatula
Medtr5g055355 0.5kb downstream 0.5kb downstream 500 false chr5: 22795382-22795881 Medicago truncatula
Medtr5g055355 1.0kb upstream 1.0kb upstream 1321 true chr5: 22795882-22797202 Medicago truncatula
Medtr5g055355 1.0kb upstream 1.0kb upstream 1000 false chr5: 22796203-22797202 Medicago truncatula
Medtr5g055355 1.0kb downstream 1.0kb downstream 1321 true chr5: 22794882-22796202 Medicago truncatula
Medtr5g055355 1.0kb downstream 1.0kb downstream 1000 false chr5: 22794882-22795881 Medicago truncatula
Medtr5g055355 2.0kb upstream 2.0kb upstream 2321 true chr5: 22795882-22798202 Medicago truncatula
Medtr5g055355 2.0kb upstream 2.0kb upstream 2000 false chr5: 22796203-22798202 Medicago truncatula
Medtr5g055355 2.0kb downstream 2.0kb downstream 2321 true chr5: 22793882-22796202 Medicago truncatula
Medtr5g055355 2.0kb downstream 2.0kb downstream 2000 false chr5: 22793882-22795881 Medicago truncatula
Medtr5g055355 5.0kb upstream 5.0kb upstream 5321 true chr5: 22795882-22801202 Medicago truncatula
Medtr5g055355 5.0kb upstream 5.0kb upstream 5000 false chr5: 22796203-22801202 Medicago truncatula
Medtr5g055355 5.0kb downstream 5.0kb downstream 5321 true chr5: 22790882-22796202 Medicago truncatula
Medtr5g055355 5.0kb downstream 5.0kb downstream 5000 false chr5: 22790882-22795881 Medicago truncatula
Medtr5g055355 10.0kb upstream 10.0kb upstream 10321 true chr5: 22795882-22806202 Medicago truncatula
Medtr5g055355 10.0kb upstream 10.0kb upstream 10000 false chr5: 22796203-22806202 Medicago truncatula
Medtr5g055355 10.0kb downstream 10.0kb downstream 10321 true chr5: 22785882-22796202 Medicago truncatula
Medtr5g055355 10.0kb downstream 10.0kb downstream 10000 false chr5: 22785882-22795881 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121625823 5273 Angiosperm Singleton cluster - no MSA
122263838 5265 Fabidae Singleton cluster - no MSA
124004973 5270 Rosid Singleton cluster - no MSA
123579069 5271 Pentapetalae Singleton cluster - no MSA
122613776 5272 Eudicot Singleton cluster - no MSA
120897927 5274 Embryophyte Singleton cluster - no MSA
122938582 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.989     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain