Gene : Medtr5g055920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00082//PF02225 - Subtilase family (Peptidase_S8) // PA domain (PA) Description:  subtilisin-like serine endopeptidase family protein
Genomic Order:  3039 Name:  ? Medtr5g055920
Secondary Identifier:  ? PAC:31089867
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g055920 0.5kb upstream 0.5kb upstream 4111 true chr5: 23038619-23042729 Medicago truncatula
Medtr5g055920 0.5kb upstream 0.5kb upstream 500 false chr5: 23038619-23039118 Medicago truncatula
Medtr5g055920 0.5kb downstream 0.5kb downstream 4111 true chr5: 23039119-23043229 Medicago truncatula
Medtr5g055920 0.5kb downstream 0.5kb downstream 500 false chr5: 23042730-23043229 Medicago truncatula
Medtr5g055920 1.0kb upstream 1.0kb upstream 4611 true chr5: 23038119-23042729 Medicago truncatula
Medtr5g055920 1.0kb upstream 1.0kb upstream 1000 false chr5: 23038119-23039118 Medicago truncatula
Medtr5g055920 1.0kb downstream 1.0kb downstream 4611 true chr5: 23039119-23043729 Medicago truncatula
Medtr5g055920 1.0kb downstream 1.0kb downstream 1000 false chr5: 23042730-23043729 Medicago truncatula
Medtr5g055920 2.0kb upstream 2.0kb upstream 5611 true chr5: 23037119-23042729 Medicago truncatula
Medtr5g055920 2.0kb upstream 2.0kb upstream 2000 false chr5: 23037119-23039118 Medicago truncatula
Medtr5g055920 2.0kb downstream 2.0kb downstream 5611 true chr5: 23039119-23044729 Medicago truncatula
Medtr5g055920 2.0kb downstream 2.0kb downstream 2000 false chr5: 23042730-23044729 Medicago truncatula
Medtr5g055920 5.0kb upstream 5.0kb upstream 8611 true chr5: 23034119-23042729 Medicago truncatula
Medtr5g055920 5.0kb upstream 5.0kb upstream 5000 false chr5: 23034119-23039118 Medicago truncatula
Medtr5g055920 5.0kb downstream 5.0kb downstream 8611 true chr5: 23039119-23047729 Medicago truncatula
Medtr5g055920 5.0kb downstream 5.0kb downstream 5000 false chr5: 23042730-23047729 Medicago truncatula
Medtr5g055920 10.0kb upstream 10.0kb upstream 13611 true chr5: 23029119-23042729 Medicago truncatula
Medtr5g055920 10.0kb upstream 10.0kb upstream 10000 false chr5: 23029119-23039118 Medicago truncatula
Medtr5g055920 10.0kb downstream 10.0kb downstream 13611 true chr5: 23039119-23052729 Medicago truncatula
Medtr5g055920 10.0kb downstream 10.0kb downstream 10000 false chr5: 23042730-23052729 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316383 5265 Fabidae View MSA
124064800 5270 Rosid View MSA
123741466 5271 Pentapetalae View MSA
122797535 5272 Eudicot View MSA
122042092 5273 Angiosperm View MSA
121350814 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain