Gene : Medtr5g055480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31042:SF10 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE-LIKE PROTEIN Description:  core-2/I-branching enzyme
Genomic Order:  3017 Name:  ? Medtr5g055480
Secondary Identifier:  ? PAC:31086553
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g055480 0.5kb upstream 0.5kb upstream 3106 true chr5: 22840980-22844085 Medicago truncatula
Medtr5g055480 0.5kb upstream 0.5kb upstream 500 false chr5: 22843586-22844085 Medicago truncatula
Medtr5g055480 0.5kb downstream 0.5kb downstream 3106 true chr5: 22840480-22843585 Medicago truncatula
Medtr5g055480 0.5kb downstream 0.5kb downstream 500 false chr5: 22840480-22840979 Medicago truncatula
Medtr5g055480 1.0kb upstream 1.0kb upstream 3606 true chr5: 22840980-22844585 Medicago truncatula
Medtr5g055480 1.0kb upstream 1.0kb upstream 1000 false chr5: 22843586-22844585 Medicago truncatula
Medtr5g055480 1.0kb downstream 1.0kb downstream 3606 true chr5: 22839980-22843585 Medicago truncatula
Medtr5g055480 1.0kb downstream 1.0kb downstream 1000 false chr5: 22839980-22840979 Medicago truncatula
Medtr5g055480 2.0kb upstream 2.0kb upstream 4606 true chr5: 22840980-22845585 Medicago truncatula
Medtr5g055480 2.0kb upstream 2.0kb upstream 2000 false chr5: 22843586-22845585 Medicago truncatula
Medtr5g055480 2.0kb downstream 2.0kb downstream 4606 true chr5: 22838980-22843585 Medicago truncatula
Medtr5g055480 2.0kb downstream 2.0kb downstream 2000 false chr5: 22838980-22840979 Medicago truncatula
Medtr5g055480 5.0kb upstream 5.0kb upstream 7606 true chr5: 22840980-22848585 Medicago truncatula
Medtr5g055480 5.0kb upstream 5.0kb upstream 5000 false chr5: 22843586-22848585 Medicago truncatula
Medtr5g055480 5.0kb downstream 5.0kb downstream 7606 true chr5: 22835980-22843585 Medicago truncatula
Medtr5g055480 5.0kb downstream 5.0kb downstream 5000 false chr5: 22835980-22840979 Medicago truncatula
Medtr5g055480 10.0kb upstream 10.0kb upstream 12606 true chr5: 22840980-22853585 Medicago truncatula
Medtr5g055480 10.0kb upstream 10.0kb upstream 10000 false chr5: 22843586-22853585 Medicago truncatula
Medtr5g055480 10.0kb downstream 10.0kb downstream 12606 true chr5: 22830980-22843585 Medicago truncatula
Medtr5g055480 10.0kb downstream 10.0kb downstream 10000 false chr5: 22830980-22840979 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295166 5265 Fabidae View MSA
124073047 5270 Rosid View MSA
123748428 5271 Pentapetalae View MSA
122794762 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.133     High High
cufflinks 7.494        
cufflinks 14.743     High  
cufflinks 2.333       Low
cufflinks 11.587     High  
cufflinks 5.768        
cufflinks 15.65     High  
cufflinks 11.957     High  
cufflinks 1.516       Low

0 Strain