Gene : Medtr5g038550 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Description:  BZIP transcription factor
Genomic Order:  2342 Name:  ? Medtr5g038550
Secondary Identifier:  ? PAC:31090771
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g038550 0.5kb upstream 0.5kb upstream 7909 true chr5: 16931940-16939848 Medicago truncatula
Medtr5g038550 0.5kb upstream 0.5kb upstream 500 false chr5: 16939349-16939848 Medicago truncatula
Medtr5g038550 0.5kb downstream 0.5kb downstream 7909 true chr5: 16931440-16939348 Medicago truncatula
Medtr5g038550 0.5kb downstream 0.5kb downstream 500 false chr5: 16931440-16931939 Medicago truncatula
Medtr5g038550 1.0kb upstream 1.0kb upstream 8409 true chr5: 16931940-16940348 Medicago truncatula
Medtr5g038550 1.0kb upstream 1.0kb upstream 1000 false chr5: 16939349-16940348 Medicago truncatula
Medtr5g038550 1.0kb downstream 1.0kb downstream 8409 true chr5: 16930940-16939348 Medicago truncatula
Medtr5g038550 1.0kb downstream 1.0kb downstream 1000 false chr5: 16930940-16931939 Medicago truncatula
Medtr5g038550 2.0kb upstream 2.0kb upstream 9409 true chr5: 16931940-16941348 Medicago truncatula
Medtr5g038550 2.0kb upstream 2.0kb upstream 2000 false chr5: 16939349-16941348 Medicago truncatula
Medtr5g038550 2.0kb downstream 2.0kb downstream 9409 true chr5: 16929940-16939348 Medicago truncatula
Medtr5g038550 2.0kb downstream 2.0kb downstream 2000 false chr5: 16929940-16931939 Medicago truncatula
Medtr5g038550 5.0kb upstream 5.0kb upstream 12409 true chr5: 16931940-16944348 Medicago truncatula
Medtr5g038550 5.0kb upstream 5.0kb upstream 5000 false chr5: 16939349-16944348 Medicago truncatula
Medtr5g038550 5.0kb downstream 5.0kb downstream 12409 true chr5: 16926940-16939348 Medicago truncatula
Medtr5g038550 5.0kb downstream 5.0kb downstream 5000 false chr5: 16926940-16931939 Medicago truncatula
Medtr5g038550 10.0kb upstream 10.0kb upstream 17409 true chr5: 16931940-16949348 Medicago truncatula
Medtr5g038550 10.0kb upstream 10.0kb upstream 10000 false chr5: 16939349-16949348 Medicago truncatula
Medtr5g038550 10.0kb downstream 10.0kb downstream 17409 true chr5: 16921940-16939348 Medicago truncatula
Medtr5g038550 10.0kb downstream 10.0kb downstream 10000 false chr5: 16921940-16931939 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305529 5265 Fabidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.795        
cufflinks 5.992       High
cufflinks 5.205        
cufflinks 4.451        
cufflinks 4.588        
cufflinks 2.706       Low
cufflinks 4.984        
cufflinks 5.405        
cufflinks 3.939        

0 Strain