Gene : Medtr5g037840 M. truncatula Mt4.0v1
Defline:  (1 of 285) PF13639 - Ring finger domain (zf-RING_2) Description:  zinc finger, C3HC4 type (RING finger) protein
Genomic Order:  2296 Name:  ? Medtr5g037840
Secondary Identifier:  ? PAC:31086613
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g037840 0.5kb upstream 0.5kb upstream 899 true chr5: 16539705-16540603 Medicago truncatula
Medtr5g037840 0.5kb upstream 0.5kb upstream 500 false chr5: 16540104-16540603 Medicago truncatula
Medtr5g037840 0.5kb downstream 0.5kb downstream 899 true chr5: 16539205-16540103 Medicago truncatula
Medtr5g037840 0.5kb downstream 0.5kb downstream 500 false chr5: 16539205-16539704 Medicago truncatula
Medtr5g037840 1.0kb upstream 1.0kb upstream 1399 true chr5: 16539705-16541103 Medicago truncatula
Medtr5g037840 1.0kb upstream 1.0kb upstream 1000 false chr5: 16540104-16541103 Medicago truncatula
Medtr5g037840 1.0kb downstream 1.0kb downstream 1399 true chr5: 16538705-16540103 Medicago truncatula
Medtr5g037840 1.0kb downstream 1.0kb downstream 1000 false chr5: 16538705-16539704 Medicago truncatula
Medtr5g037840 2.0kb upstream 2.0kb upstream 2399 true chr5: 16539705-16542103 Medicago truncatula
Medtr5g037840 2.0kb upstream 2.0kb upstream 2000 false chr5: 16540104-16542103 Medicago truncatula
Medtr5g037840 2.0kb downstream 2.0kb downstream 2399 true chr5: 16537705-16540103 Medicago truncatula
Medtr5g037840 2.0kb downstream 2.0kb downstream 2000 false chr5: 16537705-16539704 Medicago truncatula
Medtr5g037840 5.0kb upstream 5.0kb upstream 5399 true chr5: 16539705-16545103 Medicago truncatula
Medtr5g037840 5.0kb upstream 5.0kb upstream 5000 false chr5: 16540104-16545103 Medicago truncatula
Medtr5g037840 5.0kb downstream 5.0kb downstream 5399 true chr5: 16534705-16540103 Medicago truncatula
Medtr5g037840 5.0kb downstream 5.0kb downstream 5000 false chr5: 16534705-16539704 Medicago truncatula
Medtr5g037840 10.0kb upstream 10.0kb upstream 10399 true chr5: 16539705-16550103 Medicago truncatula
Medtr5g037840 10.0kb upstream 10.0kb upstream 10000 false chr5: 16540104-16550103 Medicago truncatula
Medtr5g037840 10.0kb downstream 10.0kb downstream 10399 true chr5: 16529705-16540103 Medicago truncatula
Medtr5g037840 10.0kb downstream 10.0kb downstream 10000 false chr5: 16529705-16539704 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122271374 5265 Fabidae View MSA
124074768 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain