Gene : Medtr5g038810 M. truncatula Mt4.0v1
Defline:  (1 of 15) KOG1003 - Actin filament-coating protein tropomyosin Description:  frigida-LIKE protein
Genomic Order:  2359 Name:  ? Medtr5g038810
Secondary Identifier:  ? PAC:31085866
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g038810 0.5kb upstream 0.5kb upstream 4107 true chr5: 17058112-17062218 Medicago truncatula
Medtr5g038810 0.5kb upstream 0.5kb upstream 500 false chr5: 17058112-17058611 Medicago truncatula
Medtr5g038810 0.5kb downstream 0.5kb downstream 4107 true chr5: 17058612-17062718 Medicago truncatula
Medtr5g038810 0.5kb downstream 0.5kb downstream 500 false chr5: 17062219-17062718 Medicago truncatula
Medtr5g038810 1.0kb upstream 1.0kb upstream 4607 true chr5: 17057612-17062218 Medicago truncatula
Medtr5g038810 1.0kb upstream 1.0kb upstream 1000 false chr5: 17057612-17058611 Medicago truncatula
Medtr5g038810 1.0kb downstream 1.0kb downstream 4607 true chr5: 17058612-17063218 Medicago truncatula
Medtr5g038810 1.0kb downstream 1.0kb downstream 1000 false chr5: 17062219-17063218 Medicago truncatula
Medtr5g038810 2.0kb upstream 2.0kb upstream 5607 true chr5: 17056612-17062218 Medicago truncatula
Medtr5g038810 2.0kb upstream 2.0kb upstream 2000 false chr5: 17056612-17058611 Medicago truncatula
Medtr5g038810 2.0kb downstream 2.0kb downstream 5607 true chr5: 17058612-17064218 Medicago truncatula
Medtr5g038810 2.0kb downstream 2.0kb downstream 2000 false chr5: 17062219-17064218 Medicago truncatula
Medtr5g038810 5.0kb upstream 5.0kb upstream 8607 true chr5: 17053612-17062218 Medicago truncatula
Medtr5g038810 5.0kb upstream 5.0kb upstream 5000 false chr5: 17053612-17058611 Medicago truncatula
Medtr5g038810 5.0kb downstream 5.0kb downstream 8607 true chr5: 17058612-17067218 Medicago truncatula
Medtr5g038810 5.0kb downstream 5.0kb downstream 5000 false chr5: 17062219-17067218 Medicago truncatula
Medtr5g038810 10.0kb upstream 10.0kb upstream 13607 true chr5: 17048612-17062218 Medicago truncatula
Medtr5g038810 10.0kb upstream 10.0kb upstream 10000 false chr5: 17048612-17058611 Medicago truncatula
Medtr5g038810 10.0kb downstream 10.0kb downstream 13607 true chr5: 17058612-17072218 Medicago truncatula
Medtr5g038810 10.0kb downstream 10.0kb downstream 10000 false chr5: 17062219-17072218 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain