Gene : Medtr5g038430 M. truncatula Mt4.0v1
Defline:  (1 of 811) PF00646 - F-box domain (F-box) Description:  F-box/FBD-like domain protein
Genomic Order:  2333 Name:  ? Medtr5g038430
Secondary Identifier:  ? PAC:31087998
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g038430 0.5kb upstream 0.5kb upstream 11715 true chr5: 16855039-16866753 Medicago truncatula
Medtr5g038430 0.5kb upstream 0.5kb upstream 500 false chr5: 16855039-16855538 Medicago truncatula
Medtr5g038430 0.5kb downstream 0.5kb downstream 11715 true chr5: 16855539-16867253 Medicago truncatula
Medtr5g038430 0.5kb downstream 0.5kb downstream 500 false chr5: 16866754-16867253 Medicago truncatula
Medtr5g038430 1.0kb upstream 1.0kb upstream 12215 true chr5: 16854539-16866753 Medicago truncatula
Medtr5g038430 1.0kb upstream 1.0kb upstream 1000 false chr5: 16854539-16855538 Medicago truncatula
Medtr5g038430 1.0kb downstream 1.0kb downstream 12215 true chr5: 16855539-16867753 Medicago truncatula
Medtr5g038430 1.0kb downstream 1.0kb downstream 1000 false chr5: 16866754-16867753 Medicago truncatula
Medtr5g038430 2.0kb upstream 2.0kb upstream 13215 true chr5: 16853539-16866753 Medicago truncatula
Medtr5g038430 2.0kb upstream 2.0kb upstream 2000 false chr5: 16853539-16855538 Medicago truncatula
Medtr5g038430 2.0kb downstream 2.0kb downstream 13215 true chr5: 16855539-16868753 Medicago truncatula
Medtr5g038430 2.0kb downstream 2.0kb downstream 2000 false chr5: 16866754-16868753 Medicago truncatula
Medtr5g038430 5.0kb upstream 5.0kb upstream 16215 true chr5: 16850539-16866753 Medicago truncatula
Medtr5g038430 5.0kb upstream 5.0kb upstream 5000 false chr5: 16850539-16855538 Medicago truncatula
Medtr5g038430 5.0kb downstream 5.0kb downstream 16215 true chr5: 16855539-16871753 Medicago truncatula
Medtr5g038430 5.0kb downstream 5.0kb downstream 5000 false chr5: 16866754-16871753 Medicago truncatula
Medtr5g038430 10.0kb upstream 10.0kb upstream 21215 true chr5: 16845539-16866753 Medicago truncatula
Medtr5g038430 10.0kb upstream 10.0kb upstream 10000 false chr5: 16845539-16855538 Medicago truncatula
Medtr5g038430 10.0kb downstream 10.0kb downstream 21215 true chr5: 16855539-16876753 Medicago truncatula
Medtr5g038430 10.0kb downstream 10.0kb downstream 10000 false chr5: 16866754-16876753 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316608 5265 Fabidae View MSA
124071002 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.222       High
cufflinks 1.283        
cufflinks 2.594       High
cufflinks 0.934        
cufflinks 0.957        
cufflinks 0.442       Low
cufflinks 1.392        
cufflinks 1.88        
cufflinks 0.819        

0 Strain