Gene : Medtr5g040170 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11276 - DNA POLYMERASE TYPE-X FAMILY MEMBER Description:  DNA polymerase lambda-like protein
Genomic Order:  2428 Name:  ? Medtr5g040170
Secondary Identifier:  ? PAC:31085982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g040170 0.5kb upstream 0.5kb upstream 7957 true chr5: 17674298-17682254 Medicago truncatula
Medtr5g040170 0.5kb upstream 0.5kb upstream 500 false chr5: 17674298-17674797 Medicago truncatula
Medtr5g040170 0.5kb downstream 0.5kb downstream 7957 true chr5: 17674798-17682754 Medicago truncatula
Medtr5g040170 0.5kb downstream 0.5kb downstream 500 false chr5: 17682255-17682754 Medicago truncatula
Medtr5g040170 1.0kb upstream 1.0kb upstream 8457 true chr5: 17673798-17682254 Medicago truncatula
Medtr5g040170 1.0kb upstream 1.0kb upstream 1000 false chr5: 17673798-17674797 Medicago truncatula
Medtr5g040170 1.0kb downstream 1.0kb downstream 8457 true chr5: 17674798-17683254 Medicago truncatula
Medtr5g040170 1.0kb downstream 1.0kb downstream 1000 false chr5: 17682255-17683254 Medicago truncatula
Medtr5g040170 2.0kb upstream 2.0kb upstream 9457 true chr5: 17672798-17682254 Medicago truncatula
Medtr5g040170 2.0kb upstream 2.0kb upstream 2000 false chr5: 17672798-17674797 Medicago truncatula
Medtr5g040170 2.0kb downstream 2.0kb downstream 9457 true chr5: 17674798-17684254 Medicago truncatula
Medtr5g040170 2.0kb downstream 2.0kb downstream 2000 false chr5: 17682255-17684254 Medicago truncatula
Medtr5g040170 5.0kb upstream 5.0kb upstream 12457 true chr5: 17669798-17682254 Medicago truncatula
Medtr5g040170 5.0kb upstream 5.0kb upstream 5000 false chr5: 17669798-17674797 Medicago truncatula
Medtr5g040170 5.0kb downstream 5.0kb downstream 12457 true chr5: 17674798-17687254 Medicago truncatula
Medtr5g040170 5.0kb downstream 5.0kb downstream 5000 false chr5: 17682255-17687254 Medicago truncatula
Medtr5g040170 10.0kb upstream 10.0kb upstream 17457 true chr5: 17664798-17682254 Medicago truncatula
Medtr5g040170 10.0kb upstream 10.0kb upstream 10000 false chr5: 17664798-17674797 Medicago truncatula
Medtr5g040170 10.0kb downstream 10.0kb downstream 17457 true chr5: 17674798-17692254 Medicago truncatula
Medtr5g040170 10.0kb downstream 10.0kb downstream 10000 false chr5: 17682255-17692254 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306374 5265 Fabidae View MSA
124074616 5270 Rosid View MSA
123752189 5271 Pentapetalae View MSA
122790647 5272 Eudicot View MSA
122046762 5273 Angiosperm View MSA
121345364 5274 Embryophyte View MSA
123426564 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.433        
cufflinks 0.778        
cufflinks 1.088        
cufflinks 0.296        
cufflinks 1.346       High
cufflinks 0.134     Low Low
cufflinks 0.612        
cufflinks 0.704        
cufflinks 0.716        

0 Strain