Gene : Medtr5g042200 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Description:  O-fucosyltransferase family protein
Genomic Order:  2539 Name:  ? Medtr5g042200
Secondary Identifier:  ? PAC:31088222
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g042200 0.5kb upstream 0.5kb upstream 5283 true chr5: 18558307-18563589 Medicago truncatula
Medtr5g042200 0.5kb upstream 0.5kb upstream 500 false chr5: 18563090-18563589 Medicago truncatula
Medtr5g042200 0.5kb downstream 0.5kb downstream 5283 true chr5: 18557807-18563089 Medicago truncatula
Medtr5g042200 0.5kb downstream 0.5kb downstream 500 false chr5: 18557807-18558306 Medicago truncatula
Medtr5g042200 1.0kb upstream 1.0kb upstream 5783 true chr5: 18558307-18564089 Medicago truncatula
Medtr5g042200 1.0kb upstream 1.0kb upstream 1000 false chr5: 18563090-18564089 Medicago truncatula
Medtr5g042200 1.0kb downstream 1.0kb downstream 5783 true chr5: 18557307-18563089 Medicago truncatula
Medtr5g042200 1.0kb downstream 1.0kb downstream 1000 false chr5: 18557307-18558306 Medicago truncatula
Medtr5g042200 2.0kb upstream 2.0kb upstream 6783 true chr5: 18558307-18565089 Medicago truncatula
Medtr5g042200 2.0kb upstream 2.0kb upstream 2000 false chr5: 18563090-18565089 Medicago truncatula
Medtr5g042200 2.0kb downstream 2.0kb downstream 6783 true chr5: 18556307-18563089 Medicago truncatula
Medtr5g042200 2.0kb downstream 2.0kb downstream 2000 false chr5: 18556307-18558306 Medicago truncatula
Medtr5g042200 5.0kb upstream 5.0kb upstream 9783 true chr5: 18558307-18568089 Medicago truncatula
Medtr5g042200 5.0kb upstream 5.0kb upstream 5000 false chr5: 18563090-18568089 Medicago truncatula
Medtr5g042200 5.0kb downstream 5.0kb downstream 9783 true chr5: 18553307-18563089 Medicago truncatula
Medtr5g042200 5.0kb downstream 5.0kb downstream 5000 false chr5: 18553307-18558306 Medicago truncatula
Medtr5g042200 10.0kb upstream 10.0kb upstream 14783 true chr5: 18558307-18573089 Medicago truncatula
Medtr5g042200 10.0kb upstream 10.0kb upstream 10000 false chr5: 18563090-18573089 Medicago truncatula
Medtr5g042200 10.0kb downstream 10.0kb downstream 14783 true chr5: 18548307-18563089 Medicago truncatula
Medtr5g042200 10.0kb downstream 10.0kb downstream 10000 false chr5: 18548307-18558306 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310707 5265 Fabidae View MSA
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.449        
cufflinks 1.127        
cufflinks 1.149        
cufflinks 0.538        
cufflinks 1.386        
cufflinks 0.089     Low Low
cufflinks 0.747        
cufflinks 0.887        
cufflinks 0.541        

0 Strain