Gene : Medtr5g042920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Description:  WRKY transcription factor 3
Genomic Order:  2578 Name:  ? Medtr5g042920
Secondary Identifier:  ? PAC:31087746
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g042920 0.5kb upstream 0.5kb upstream 4536 true chr5: 18874422-18878957 Medicago truncatula
Medtr5g042920 0.5kb upstream 0.5kb upstream 500 false chr5: 18878458-18878957 Medicago truncatula
Medtr5g042920 0.5kb downstream 0.5kb downstream 4536 true chr5: 18873922-18878457 Medicago truncatula
Medtr5g042920 0.5kb downstream 0.5kb downstream 500 false chr5: 18873922-18874421 Medicago truncatula
Medtr5g042920 1.0kb upstream 1.0kb upstream 5036 true chr5: 18874422-18879457 Medicago truncatula
Medtr5g042920 1.0kb upstream 1.0kb upstream 1000 false chr5: 18878458-18879457 Medicago truncatula
Medtr5g042920 1.0kb downstream 1.0kb downstream 5036 true chr5: 18873422-18878457 Medicago truncatula
Medtr5g042920 1.0kb downstream 1.0kb downstream 1000 false chr5: 18873422-18874421 Medicago truncatula
Medtr5g042920 2.0kb upstream 2.0kb upstream 6036 true chr5: 18874422-18880457 Medicago truncatula
Medtr5g042920 2.0kb upstream 2.0kb upstream 2000 false chr5: 18878458-18880457 Medicago truncatula
Medtr5g042920 2.0kb downstream 2.0kb downstream 6036 true chr5: 18872422-18878457 Medicago truncatula
Medtr5g042920 2.0kb downstream 2.0kb downstream 2000 false chr5: 18872422-18874421 Medicago truncatula
Medtr5g042920 5.0kb upstream 5.0kb upstream 9036 true chr5: 18874422-18883457 Medicago truncatula
Medtr5g042920 5.0kb upstream 5.0kb upstream 5000 false chr5: 18878458-18883457 Medicago truncatula
Medtr5g042920 5.0kb downstream 5.0kb downstream 9036 true chr5: 18869422-18878457 Medicago truncatula
Medtr5g042920 5.0kb downstream 5.0kb downstream 5000 false chr5: 18869422-18874421 Medicago truncatula
Medtr5g042920 10.0kb upstream 10.0kb upstream 14036 true chr5: 18874422-18888457 Medicago truncatula
Medtr5g042920 10.0kb upstream 10.0kb upstream 10000 false chr5: 18878458-18888457 Medicago truncatula
Medtr5g042920 10.0kb downstream 10.0kb downstream 14036 true chr5: 18864422-18878457 Medicago truncatula
Medtr5g042920 10.0kb downstream 10.0kb downstream 10000 false chr5: 18864422-18874421 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299265 5265 Fabidae View MSA
124070868 5270 Rosid View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.571       High
cufflinks 1.342        
cufflinks 1.56        
cufflinks 1.251        
cufflinks 1.442        
cufflinks 2.122        
cufflinks 2.291       High
cufflinks 1.067       Low
cufflinks 1.554        

0 Strain