Gene : Medtr5g041930 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG3292 - Predicted membrane protein Description:  YGL010w-like protein
Genomic Order:  2523 Name:  ? Medtr5g041930
Secondary Identifier:  ? PAC:31088107
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041930 0.5kb upstream 0.5kb upstream 4902 true chr5: 18420416-18425317 Medicago truncatula
Medtr5g041930 0.5kb upstream 0.5kb upstream 500 false chr5: 18420416-18420915 Medicago truncatula
Medtr5g041930 0.5kb downstream 0.5kb downstream 4902 true chr5: 18420916-18425817 Medicago truncatula
Medtr5g041930 0.5kb downstream 0.5kb downstream 500 false chr5: 18425318-18425817 Medicago truncatula
Medtr5g041930 1.0kb upstream 1.0kb upstream 5402 true chr5: 18419916-18425317 Medicago truncatula
Medtr5g041930 1.0kb upstream 1.0kb upstream 1000 false chr5: 18419916-18420915 Medicago truncatula
Medtr5g041930 1.0kb downstream 1.0kb downstream 5402 true chr5: 18420916-18426317 Medicago truncatula
Medtr5g041930 1.0kb downstream 1.0kb downstream 1000 false chr5: 18425318-18426317 Medicago truncatula
Medtr5g041930 2.0kb upstream 2.0kb upstream 6402 true chr5: 18418916-18425317 Medicago truncatula
Medtr5g041930 2.0kb upstream 2.0kb upstream 2000 false chr5: 18418916-18420915 Medicago truncatula
Medtr5g041930 2.0kb downstream 2.0kb downstream 6402 true chr5: 18420916-18427317 Medicago truncatula
Medtr5g041930 2.0kb downstream 2.0kb downstream 2000 false chr5: 18425318-18427317 Medicago truncatula
Medtr5g041930 5.0kb upstream 5.0kb upstream 9402 true chr5: 18415916-18425317 Medicago truncatula
Medtr5g041930 5.0kb upstream 5.0kb upstream 5000 false chr5: 18415916-18420915 Medicago truncatula
Medtr5g041930 5.0kb downstream 5.0kb downstream 9402 true chr5: 18420916-18430317 Medicago truncatula
Medtr5g041930 5.0kb downstream 5.0kb downstream 5000 false chr5: 18425318-18430317 Medicago truncatula
Medtr5g041930 10.0kb upstream 10.0kb upstream 14402 true chr5: 18410916-18425317 Medicago truncatula
Medtr5g041930 10.0kb upstream 10.0kb upstream 10000 false chr5: 18410916-18420915 Medicago truncatula
Medtr5g041930 10.0kb downstream 10.0kb downstream 14402 true chr5: 18420916-18435317 Medicago truncatula
Medtr5g041930 10.0kb downstream 10.0kb downstream 10000 false chr5: 18425318-18435317 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
122307388 5265 Fabidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.433     High  
cufflinks 3.365       Low
cufflinks 4.223        
cufflinks 17.1     High High
cufflinks 3.011       Low
cufflinks 14.55     High  
cufflinks 14.752     High  
cufflinks 3.75        
cufflinks 9.94        

0 Strain