Gene : Medtr5g041940 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31719:SF40 - NAC TRANSCRIPTION FACTOR 29 Description:  NAC transcription factor-like protein
Genomic Order:  2524 Name:  ? Medtr5g041940
Secondary Identifier:  ? PAC:31091321
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041940 0.5kb upstream 0.5kb upstream 2315 true chr5: 18427695-18430009 Medicago truncatula
Medtr5g041940 0.5kb upstream 0.5kb upstream 500 false chr5: 18429510-18430009 Medicago truncatula
Medtr5g041940 0.5kb downstream 0.5kb downstream 2315 true chr5: 18427195-18429509 Medicago truncatula
Medtr5g041940 0.5kb downstream 0.5kb downstream 500 false chr5: 18427195-18427694 Medicago truncatula
Medtr5g041940 1.0kb upstream 1.0kb upstream 2815 true chr5: 18427695-18430509 Medicago truncatula
Medtr5g041940 1.0kb upstream 1.0kb upstream 1000 false chr5: 18429510-18430509 Medicago truncatula
Medtr5g041940 1.0kb downstream 1.0kb downstream 2815 true chr5: 18426695-18429509 Medicago truncatula
Medtr5g041940 1.0kb downstream 1.0kb downstream 1000 false chr5: 18426695-18427694 Medicago truncatula
Medtr5g041940 2.0kb upstream 2.0kb upstream 3815 true chr5: 18427695-18431509 Medicago truncatula
Medtr5g041940 2.0kb upstream 2.0kb upstream 2000 false chr5: 18429510-18431509 Medicago truncatula
Medtr5g041940 2.0kb downstream 2.0kb downstream 3815 true chr5: 18425695-18429509 Medicago truncatula
Medtr5g041940 2.0kb downstream 2.0kb downstream 2000 false chr5: 18425695-18427694 Medicago truncatula
Medtr5g041940 5.0kb upstream 5.0kb upstream 6815 true chr5: 18427695-18434509 Medicago truncatula
Medtr5g041940 5.0kb upstream 5.0kb upstream 5000 false chr5: 18429510-18434509 Medicago truncatula
Medtr5g041940 5.0kb downstream 5.0kb downstream 6815 true chr5: 18422695-18429509 Medicago truncatula
Medtr5g041940 5.0kb downstream 5.0kb downstream 5000 false chr5: 18422695-18427694 Medicago truncatula
Medtr5g041940 10.0kb upstream 10.0kb upstream 11815 true chr5: 18427695-18439509 Medicago truncatula
Medtr5g041940 10.0kb upstream 10.0kb upstream 10000 false chr5: 18429510-18439509 Medicago truncatula
Medtr5g041940 10.0kb downstream 10.0kb downstream 11815 true chr5: 18417695-18429509 Medicago truncatula
Medtr5g041940 10.0kb downstream 10.0kb downstream 10000 false chr5: 18417695-18427694 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306888 5265 Fabidae View MSA
124065483 5270 Rosid View MSA
123736663 5271 Pentapetalae View MSA
122792841 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 134.5     High High
cufflinks 21.792     High  
cufflinks 27.473     High  
cufflinks 22.464     High  
cufflinks 18.898     High  
cufflinks 53.164     High  
cufflinks 71.537     High High
cufflinks 26.2     High  
cufflinks 20.172     High  

0 Strain