Gene : Medtr5g041790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10358//PTHR10358:SF8 - ENDOSULFINE Description:  cAMP-regulated phosphoprotein-like protein
Genomic Order:  2520 Name:  ? Medtr5g041790
Secondary Identifier:  ? PAC:31087092
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041790 0.5kb upstream 0.5kb upstream 3987 true chr5: 18348938-18352924 Medicago truncatula
Medtr5g041790 0.5kb upstream 0.5kb upstream 500 false chr5: 18352425-18352924 Medicago truncatula
Medtr5g041790 0.5kb downstream 0.5kb downstream 3987 true chr5: 18348438-18352424 Medicago truncatula
Medtr5g041790 0.5kb downstream 0.5kb downstream 500 false chr5: 18348438-18348937 Medicago truncatula
Medtr5g041790 1.0kb upstream 1.0kb upstream 4487 true chr5: 18348938-18353424 Medicago truncatula
Medtr5g041790 1.0kb upstream 1.0kb upstream 1000 false chr5: 18352425-18353424 Medicago truncatula
Medtr5g041790 1.0kb downstream 1.0kb downstream 4487 true chr5: 18347938-18352424 Medicago truncatula
Medtr5g041790 1.0kb downstream 1.0kb downstream 1000 false chr5: 18347938-18348937 Medicago truncatula
Medtr5g041790 2.0kb upstream 2.0kb upstream 5487 true chr5: 18348938-18354424 Medicago truncatula
Medtr5g041790 2.0kb upstream 2.0kb upstream 2000 false chr5: 18352425-18354424 Medicago truncatula
Medtr5g041790 2.0kb downstream 2.0kb downstream 5487 true chr5: 18346938-18352424 Medicago truncatula
Medtr5g041790 2.0kb downstream 2.0kb downstream 2000 false chr5: 18346938-18348937 Medicago truncatula
Medtr5g041790 5.0kb upstream 5.0kb upstream 8487 true chr5: 18348938-18357424 Medicago truncatula
Medtr5g041790 5.0kb upstream 5.0kb upstream 5000 false chr5: 18352425-18357424 Medicago truncatula
Medtr5g041790 5.0kb downstream 5.0kb downstream 8487 true chr5: 18343938-18352424 Medicago truncatula
Medtr5g041790 5.0kb downstream 5.0kb downstream 5000 false chr5: 18343938-18348937 Medicago truncatula
Medtr5g041790 10.0kb upstream 10.0kb upstream 13487 true chr5: 18348938-18362424 Medicago truncatula
Medtr5g041790 10.0kb upstream 10.0kb upstream 10000 false chr5: 18352425-18362424 Medicago truncatula
Medtr5g041790 10.0kb downstream 10.0kb downstream 13487 true chr5: 18338938-18352424 Medicago truncatula
Medtr5g041790 10.0kb downstream 10.0kb downstream 10000 false chr5: 18338938-18348937 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304850 5265 Fabidae View MSA
124064280 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.059        
cufflinks 1.79        
cufflinks 1.814        
cufflinks 1.953        
cufflinks 1.739        
cufflinks 0.921       Low
cufflinks 2.512       High
cufflinks 1.55        
cufflinks 1.595        

0 Strain