Gene : Medtr5g042120 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  2533 Name:  ? Medtr5g042120
Secondary Identifier:  ? PAC:31089073
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0 Pathways

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g042120 0.5kb upstream 0.5kb upstream 1286 true chr5: 18529267-18530552 Medicago truncatula
Medtr5g042120 0.5kb upstream 0.5kb upstream 500 false chr5: 18530053-18530552 Medicago truncatula
Medtr5g042120 0.5kb downstream 0.5kb downstream 1286 true chr5: 18528767-18530052 Medicago truncatula
Medtr5g042120 0.5kb downstream 0.5kb downstream 500 false chr5: 18528767-18529266 Medicago truncatula
Medtr5g042120 1.0kb upstream 1.0kb upstream 1786 true chr5: 18529267-18531052 Medicago truncatula
Medtr5g042120 1.0kb upstream 1.0kb upstream 1000 false chr5: 18530053-18531052 Medicago truncatula
Medtr5g042120 1.0kb downstream 1.0kb downstream 1786 true chr5: 18528267-18530052 Medicago truncatula
Medtr5g042120 1.0kb downstream 1.0kb downstream 1000 false chr5: 18528267-18529266 Medicago truncatula
Medtr5g042120 2.0kb upstream 2.0kb upstream 2786 true chr5: 18529267-18532052 Medicago truncatula
Medtr5g042120 2.0kb upstream 2.0kb upstream 2000 false chr5: 18530053-18532052 Medicago truncatula
Medtr5g042120 2.0kb downstream 2.0kb downstream 2786 true chr5: 18527267-18530052 Medicago truncatula
Medtr5g042120 2.0kb downstream 2.0kb downstream 2000 false chr5: 18527267-18529266 Medicago truncatula
Medtr5g042120 5.0kb upstream 5.0kb upstream 5786 true chr5: 18529267-18535052 Medicago truncatula
Medtr5g042120 5.0kb upstream 5.0kb upstream 5000 false chr5: 18530053-18535052 Medicago truncatula
Medtr5g042120 5.0kb downstream 5.0kb downstream 5786 true chr5: 18524267-18530052 Medicago truncatula
Medtr5g042120 5.0kb downstream 5.0kb downstream 5000 false chr5: 18524267-18529266 Medicago truncatula
Medtr5g042120 10.0kb upstream 10.0kb upstream 10786 true chr5: 18529267-18540052 Medicago truncatula
Medtr5g042120 10.0kb upstream 10.0kb upstream 10000 false chr5: 18530053-18540052 Medicago truncatula
Medtr5g042120 10.0kb downstream 10.0kb downstream 10786 true chr5: 18519267-18530052 Medicago truncatula
Medtr5g042120 10.0kb downstream 10.0kb downstream 10000 false chr5: 18519267-18529266 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain