Gene : Medtr5g041650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Description:  MADS-box transcription factor family protein
Genomic Order:  2510 Name:  ? Medtr5g041650
Secondary Identifier:  ? PAC:31086259
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041650 0.5kb upstream 0.5kb upstream 6029 true chr5: 18282669-18288697 Medicago truncatula
Medtr5g041650 0.5kb upstream 0.5kb upstream 500 false chr5: 18282669-18283168 Medicago truncatula
Medtr5g041650 0.5kb downstream 0.5kb downstream 6029 true chr5: 18283169-18289197 Medicago truncatula
Medtr5g041650 0.5kb downstream 0.5kb downstream 500 false chr5: 18288698-18289197 Medicago truncatula
Medtr5g041650 1.0kb upstream 1.0kb upstream 6529 true chr5: 18282169-18288697 Medicago truncatula
Medtr5g041650 1.0kb upstream 1.0kb upstream 1000 false chr5: 18282169-18283168 Medicago truncatula
Medtr5g041650 1.0kb downstream 1.0kb downstream 6529 true chr5: 18283169-18289697 Medicago truncatula
Medtr5g041650 1.0kb downstream 1.0kb downstream 1000 false chr5: 18288698-18289697 Medicago truncatula
Medtr5g041650 2.0kb upstream 2.0kb upstream 7529 true chr5: 18281169-18288697 Medicago truncatula
Medtr5g041650 2.0kb upstream 2.0kb upstream 2000 false chr5: 18281169-18283168 Medicago truncatula
Medtr5g041650 2.0kb downstream 2.0kb downstream 7529 true chr5: 18283169-18290697 Medicago truncatula
Medtr5g041650 2.0kb downstream 2.0kb downstream 2000 false chr5: 18288698-18290697 Medicago truncatula
Medtr5g041650 5.0kb upstream 5.0kb upstream 10529 true chr5: 18278169-18288697 Medicago truncatula
Medtr5g041650 5.0kb upstream 5.0kb upstream 5000 false chr5: 18278169-18283168 Medicago truncatula
Medtr5g041650 5.0kb downstream 5.0kb downstream 10529 true chr5: 18283169-18293697 Medicago truncatula
Medtr5g041650 5.0kb downstream 5.0kb downstream 5000 false chr5: 18288698-18293697 Medicago truncatula
Medtr5g041650 10.0kb upstream 10.0kb upstream 15529 true chr5: 18273169-18288697 Medicago truncatula
Medtr5g041650 10.0kb upstream 10.0kb upstream 10000 false chr5: 18273169-18283168 Medicago truncatula
Medtr5g041650 10.0kb downstream 10.0kb downstream 15529 true chr5: 18283169-18298697 Medicago truncatula
Medtr5g041650 10.0kb downstream 10.0kb downstream 10000 false chr5: 18288698-18298697 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312071 5265 Fabidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain