Gene : Medtr5g041290 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12899:SF8 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Description:  50S ribosomal L18-like protein
Genomic Order:  2489 Name:  ? Medtr5g041290
Secondary Identifier:  ? PAC:31091816
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041290 0.5kb upstream 0.5kb upstream 2477 true chr5: 18143638-18146114 Medicago truncatula
Medtr5g041290 0.5kb upstream 0.5kb upstream 500 false chr5: 18145615-18146114 Medicago truncatula
Medtr5g041290 0.5kb downstream 0.5kb downstream 2477 true chr5: 18143138-18145614 Medicago truncatula
Medtr5g041290 0.5kb downstream 0.5kb downstream 500 false chr5: 18143138-18143637 Medicago truncatula
Medtr5g041290 1.0kb upstream 1.0kb upstream 2977 true chr5: 18143638-18146614 Medicago truncatula
Medtr5g041290 1.0kb upstream 1.0kb upstream 1000 false chr5: 18145615-18146614 Medicago truncatula
Medtr5g041290 1.0kb downstream 1.0kb downstream 2977 true chr5: 18142638-18145614 Medicago truncatula
Medtr5g041290 1.0kb downstream 1.0kb downstream 1000 false chr5: 18142638-18143637 Medicago truncatula
Medtr5g041290 2.0kb upstream 2.0kb upstream 3977 true chr5: 18143638-18147614 Medicago truncatula
Medtr5g041290 2.0kb upstream 2.0kb upstream 2000 false chr5: 18145615-18147614 Medicago truncatula
Medtr5g041290 2.0kb downstream 2.0kb downstream 3977 true chr5: 18141638-18145614 Medicago truncatula
Medtr5g041290 2.0kb downstream 2.0kb downstream 2000 false chr5: 18141638-18143637 Medicago truncatula
Medtr5g041290 5.0kb upstream 5.0kb upstream 6977 true chr5: 18143638-18150614 Medicago truncatula
Medtr5g041290 5.0kb upstream 5.0kb upstream 5000 false chr5: 18145615-18150614 Medicago truncatula
Medtr5g041290 5.0kb downstream 5.0kb downstream 6977 true chr5: 18138638-18145614 Medicago truncatula
Medtr5g041290 5.0kb downstream 5.0kb downstream 5000 false chr5: 18138638-18143637 Medicago truncatula
Medtr5g041290 10.0kb upstream 10.0kb upstream 11977 true chr5: 18143638-18155614 Medicago truncatula
Medtr5g041290 10.0kb upstream 10.0kb upstream 10000 false chr5: 18145615-18155614 Medicago truncatula
Medtr5g041290 10.0kb downstream 10.0kb downstream 11977 true chr5: 18133638-18145614 Medicago truncatula
Medtr5g041290 10.0kb downstream 10.0kb downstream 10000 false chr5: 18133638-18143637 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305090 5265 Fabidae View MSA
124068538 5270 Rosid View MSA
123741435 5271 Pentapetalae View MSA
122786788 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.292        
cufflinks 0.945        
cufflinks 2.1       High
cufflinks 0.165       Low
cufflinks 2.107       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.226        
cufflinks 1.317        
cufflinks 0.126       Low

0 Strain