Gene : Medtr5g041400 M. truncatula Mt4.0v1
Defline:  (1 of 12) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Description:  DOF domain, zinc finger protein
Genomic Order:  2498 Name:  ? Medtr5g041400
Secondary Identifier:  ? PAC:31086499
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041400 0.5kb upstream 0.5kb upstream 2271 true chr5: 18191925-18194195 Medicago truncatula
Medtr5g041400 0.5kb upstream 0.5kb upstream 500 false chr5: 18191925-18192424 Medicago truncatula
Medtr5g041400 0.5kb downstream 0.5kb downstream 2271 true chr5: 18192425-18194695 Medicago truncatula
Medtr5g041400 0.5kb downstream 0.5kb downstream 500 false chr5: 18194196-18194695 Medicago truncatula
Medtr5g041400 1.0kb upstream 1.0kb upstream 2771 true chr5: 18191425-18194195 Medicago truncatula
Medtr5g041400 1.0kb upstream 1.0kb upstream 1000 false chr5: 18191425-18192424 Medicago truncatula
Medtr5g041400 1.0kb downstream 1.0kb downstream 2771 true chr5: 18192425-18195195 Medicago truncatula
Medtr5g041400 1.0kb downstream 1.0kb downstream 1000 false chr5: 18194196-18195195 Medicago truncatula
Medtr5g041400 2.0kb upstream 2.0kb upstream 3771 true chr5: 18190425-18194195 Medicago truncatula
Medtr5g041400 2.0kb upstream 2.0kb upstream 2000 false chr5: 18190425-18192424 Medicago truncatula
Medtr5g041400 2.0kb downstream 2.0kb downstream 3771 true chr5: 18192425-18196195 Medicago truncatula
Medtr5g041400 2.0kb downstream 2.0kb downstream 2000 false chr5: 18194196-18196195 Medicago truncatula
Medtr5g041400 5.0kb upstream 5.0kb upstream 6771 true chr5: 18187425-18194195 Medicago truncatula
Medtr5g041400 5.0kb upstream 5.0kb upstream 5000 false chr5: 18187425-18192424 Medicago truncatula
Medtr5g041400 5.0kb downstream 5.0kb downstream 6771 true chr5: 18192425-18199195 Medicago truncatula
Medtr5g041400 5.0kb downstream 5.0kb downstream 5000 false chr5: 18194196-18199195 Medicago truncatula
Medtr5g041400 10.0kb upstream 10.0kb upstream 11771 true chr5: 18182425-18194195 Medicago truncatula
Medtr5g041400 10.0kb upstream 10.0kb upstream 10000 false chr5: 18182425-18192424 Medicago truncatula
Medtr5g041400 10.0kb downstream 10.0kb downstream 11771 true chr5: 18192425-18204195 Medicago truncatula
Medtr5g041400 10.0kb downstream 10.0kb downstream 10000 false chr5: 18194196-18204195 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298902 5265 Fabidae View MSA
124038369 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.211        
cufflinks 0.078        
cufflinks 0.034     Low Low
cufflinks 0.104        
cufflinks 0.197        
cufflinks 0.034     Low Low
cufflinks 0.448       High
cufflinks 0.045     Low  
cufflinks 0.693       High

0 Strain