Gene : Medtr5g041350 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31499:SF11 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Description:  myb-like transcription factor family protein
Genomic Order:  2496 Name:  ? Medtr5g041350
Secondary Identifier:  ? PAC:31085701
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041350 0.5kb upstream 0.5kb upstream 2841 true chr5: 18168470-18171310 Medicago truncatula
Medtr5g041350 0.5kb upstream 0.5kb upstream 500 false chr5: 18170811-18171310 Medicago truncatula
Medtr5g041350 0.5kb downstream 0.5kb downstream 2841 true chr5: 18167970-18170810 Medicago truncatula
Medtr5g041350 0.5kb downstream 0.5kb downstream 500 false chr5: 18167970-18168469 Medicago truncatula
Medtr5g041350 1.0kb upstream 1.0kb upstream 3341 true chr5: 18168470-18171810 Medicago truncatula
Medtr5g041350 1.0kb upstream 1.0kb upstream 1000 false chr5: 18170811-18171810 Medicago truncatula
Medtr5g041350 1.0kb downstream 1.0kb downstream 3341 true chr5: 18167470-18170810 Medicago truncatula
Medtr5g041350 1.0kb downstream 1.0kb downstream 1000 false chr5: 18167470-18168469 Medicago truncatula
Medtr5g041350 2.0kb upstream 2.0kb upstream 4341 true chr5: 18168470-18172810 Medicago truncatula
Medtr5g041350 2.0kb upstream 2.0kb upstream 2000 false chr5: 18170811-18172810 Medicago truncatula
Medtr5g041350 2.0kb downstream 2.0kb downstream 4341 true chr5: 18166470-18170810 Medicago truncatula
Medtr5g041350 2.0kb downstream 2.0kb downstream 2000 false chr5: 18166470-18168469 Medicago truncatula
Medtr5g041350 5.0kb upstream 5.0kb upstream 7341 true chr5: 18168470-18175810 Medicago truncatula
Medtr5g041350 5.0kb upstream 5.0kb upstream 5000 false chr5: 18170811-18175810 Medicago truncatula
Medtr5g041350 5.0kb downstream 5.0kb downstream 7341 true chr5: 18163470-18170810 Medicago truncatula
Medtr5g041350 5.0kb downstream 5.0kb downstream 5000 false chr5: 18163470-18168469 Medicago truncatula
Medtr5g041350 10.0kb upstream 10.0kb upstream 12341 true chr5: 18168470-18180810 Medicago truncatula
Medtr5g041350 10.0kb upstream 10.0kb upstream 10000 false chr5: 18170811-18180810 Medicago truncatula
Medtr5g041350 10.0kb downstream 10.0kb downstream 12341 true chr5: 18158470-18170810 Medicago truncatula
Medtr5g041350 10.0kb downstream 10.0kb downstream 10000 false chr5: 18158470-18168469 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791710 5273 Angiosperm View MSA
122309640 5265 Fabidae View MSA
124067697 5270 Rosid View MSA
123742453 5271 Pentapetalae View MSA
122786457 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low Low
cufflinks 0.849       High
cufflinks 0.466        
cufflinks 0.069        
cufflinks 1.15       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079        
cufflinks 0.439        
cufflinks 0.085     Low  

0 Strain