Gene : Medtr5g041380 M. truncatula Mt4.0v1
Defline:  (1 of 12) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Description:  DOF domain, zinc finger protein
Genomic Order:  2497 Name:  ? Medtr5g041380
Secondary Identifier:  ? PAC:31086069
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041380 0.5kb upstream 0.5kb upstream 1881 true chr5: 18186991-18188871 Medicago truncatula
Medtr5g041380 0.5kb upstream 0.5kb upstream 500 false chr5: 18186991-18187490 Medicago truncatula
Medtr5g041380 0.5kb downstream 0.5kb downstream 1881 true chr5: 18187491-18189371 Medicago truncatula
Medtr5g041380 0.5kb downstream 0.5kb downstream 500 false chr5: 18188872-18189371 Medicago truncatula
Medtr5g041380 1.0kb upstream 1.0kb upstream 2381 true chr5: 18186491-18188871 Medicago truncatula
Medtr5g041380 1.0kb upstream 1.0kb upstream 1000 false chr5: 18186491-18187490 Medicago truncatula
Medtr5g041380 1.0kb downstream 1.0kb downstream 2381 true chr5: 18187491-18189871 Medicago truncatula
Medtr5g041380 1.0kb downstream 1.0kb downstream 1000 false chr5: 18188872-18189871 Medicago truncatula
Medtr5g041380 2.0kb upstream 2.0kb upstream 3381 true chr5: 18185491-18188871 Medicago truncatula
Medtr5g041380 2.0kb upstream 2.0kb upstream 2000 false chr5: 18185491-18187490 Medicago truncatula
Medtr5g041380 2.0kb downstream 2.0kb downstream 3381 true chr5: 18187491-18190871 Medicago truncatula
Medtr5g041380 2.0kb downstream 2.0kb downstream 2000 false chr5: 18188872-18190871 Medicago truncatula
Medtr5g041380 5.0kb upstream 5.0kb upstream 6381 true chr5: 18182491-18188871 Medicago truncatula
Medtr5g041380 5.0kb upstream 5.0kb upstream 5000 false chr5: 18182491-18187490 Medicago truncatula
Medtr5g041380 5.0kb downstream 5.0kb downstream 6381 true chr5: 18187491-18193871 Medicago truncatula
Medtr5g041380 5.0kb downstream 5.0kb downstream 5000 false chr5: 18188872-18193871 Medicago truncatula
Medtr5g041380 10.0kb upstream 10.0kb upstream 11381 true chr5: 18177491-18188871 Medicago truncatula
Medtr5g041380 10.0kb upstream 10.0kb upstream 10000 false chr5: 18177491-18187490 Medicago truncatula
Medtr5g041380 10.0kb downstream 10.0kb downstream 11381 true chr5: 18187491-18198871 Medicago truncatula
Medtr5g041380 10.0kb downstream 10.0kb downstream 10000 false chr5: 18188872-18198871 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298902 5265 Fabidae View MSA
124038369 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.071        
cufflinks 0.084        
cufflinks 0.032     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096        
cufflinks 0.354       High
cufflinks 0.082        
cufflinks 0.047     Low  
cufflinks 0.332       High

0 Strain