Gene : Medtr5g029240 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10705 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1 Description:  defender against apoptotic death-like protein
Genomic Order:  1726 Name:  ? Medtr5g029240
Secondary Identifier:  ? PAC:31087341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g029240 0.5kb upstream 0.5kb upstream 2740 true chr5: 12234269-12237008 Medicago truncatula
Medtr5g029240 0.5kb upstream 0.5kb upstream 500 false chr5: 12236509-12237008 Medicago truncatula
Medtr5g029240 0.5kb downstream 0.5kb downstream 2740 true chr5: 12233769-12236508 Medicago truncatula
Medtr5g029240 0.5kb downstream 0.5kb downstream 500 false chr5: 12233769-12234268 Medicago truncatula
Medtr5g029240 1.0kb upstream 1.0kb upstream 3240 true chr5: 12234269-12237508 Medicago truncatula
Medtr5g029240 1.0kb upstream 1.0kb upstream 1000 false chr5: 12236509-12237508 Medicago truncatula
Medtr5g029240 1.0kb downstream 1.0kb downstream 3240 true chr5: 12233269-12236508 Medicago truncatula
Medtr5g029240 1.0kb downstream 1.0kb downstream 1000 false chr5: 12233269-12234268 Medicago truncatula
Medtr5g029240 2.0kb upstream 2.0kb upstream 4240 true chr5: 12234269-12238508 Medicago truncatula
Medtr5g029240 2.0kb upstream 2.0kb upstream 2000 false chr5: 12236509-12238508 Medicago truncatula
Medtr5g029240 2.0kb downstream 2.0kb downstream 4240 true chr5: 12232269-12236508 Medicago truncatula
Medtr5g029240 2.0kb downstream 2.0kb downstream 2000 false chr5: 12232269-12234268 Medicago truncatula
Medtr5g029240 5.0kb upstream 5.0kb upstream 7240 true chr5: 12234269-12241508 Medicago truncatula
Medtr5g029240 5.0kb upstream 5.0kb upstream 5000 false chr5: 12236509-12241508 Medicago truncatula
Medtr5g029240 5.0kb downstream 5.0kb downstream 7240 true chr5: 12229269-12236508 Medicago truncatula
Medtr5g029240 5.0kb downstream 5.0kb downstream 5000 false chr5: 12229269-12234268 Medicago truncatula
Medtr5g029240 10.0kb upstream 10.0kb upstream 12240 true chr5: 12234269-12246508 Medicago truncatula
Medtr5g029240 10.0kb upstream 10.0kb upstream 10000 false chr5: 12236509-12246508 Medicago truncatula
Medtr5g029240 10.0kb downstream 10.0kb downstream 12240 true chr5: 12224269-12236508 Medicago truncatula
Medtr5g029240 10.0kb downstream 10.0kb downstream 10000 false chr5: 12224269-12234268 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311563 5265 Fabidae View MSA
124061217 5270 Rosid View MSA
123742864 5271 Pentapetalae View MSA
122792667 5272 Eudicot View MSA
122049085 5273 Angiosperm View MSA
121345892 5274 Embryophyte View MSA
123425631 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.29     High  
cufflinks 16.192     High  
cufflinks 15.159     High  
cufflinks 122.342     High High
cufflinks 15.539     High  
cufflinks 250.639     High High
cufflinks 31.857     High  
cufflinks 14.897     High  
cufflinks 41.406     High  

0 Strain