Gene : Medtr5g029470 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31496:SF10 - TRANSCRIPTION FACTOR KAN2-RELATED Description:  transcription factor KAN2
Genomic Order:  1738 Name:  ? Medtr5g029470
Secondary Identifier:  ? PAC:31089752
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g029470 0.5kb upstream 0.5kb upstream 6433 true chr5: 12342941-12349373 Medicago truncatula
Medtr5g029470 0.5kb upstream 0.5kb upstream 500 false chr5: 12342941-12343440 Medicago truncatula
Medtr5g029470 0.5kb downstream 0.5kb downstream 6433 true chr5: 12343441-12349873 Medicago truncatula
Medtr5g029470 0.5kb downstream 0.5kb downstream 500 false chr5: 12349374-12349873 Medicago truncatula
Medtr5g029470 1.0kb upstream 1.0kb upstream 6933 true chr5: 12342441-12349373 Medicago truncatula
Medtr5g029470 1.0kb upstream 1.0kb upstream 1000 false chr5: 12342441-12343440 Medicago truncatula
Medtr5g029470 1.0kb downstream 1.0kb downstream 6933 true chr5: 12343441-12350373 Medicago truncatula
Medtr5g029470 1.0kb downstream 1.0kb downstream 1000 false chr5: 12349374-12350373 Medicago truncatula
Medtr5g029470 2.0kb upstream 2.0kb upstream 7933 true chr5: 12341441-12349373 Medicago truncatula
Medtr5g029470 2.0kb upstream 2.0kb upstream 2000 false chr5: 12341441-12343440 Medicago truncatula
Medtr5g029470 2.0kb downstream 2.0kb downstream 7933 true chr5: 12343441-12351373 Medicago truncatula
Medtr5g029470 2.0kb downstream 2.0kb downstream 2000 false chr5: 12349374-12351373 Medicago truncatula
Medtr5g029470 5.0kb upstream 5.0kb upstream 10933 true chr5: 12338441-12349373 Medicago truncatula
Medtr5g029470 5.0kb upstream 5.0kb upstream 5000 false chr5: 12338441-12343440 Medicago truncatula
Medtr5g029470 5.0kb downstream 5.0kb downstream 10933 true chr5: 12343441-12354373 Medicago truncatula
Medtr5g029470 5.0kb downstream 5.0kb downstream 5000 false chr5: 12349374-12354373 Medicago truncatula
Medtr5g029470 10.0kb upstream 10.0kb upstream 15933 true chr5: 12333441-12349373 Medicago truncatula
Medtr5g029470 10.0kb upstream 10.0kb upstream 10000 false chr5: 12333441-12343440 Medicago truncatula
Medtr5g029470 10.0kb downstream 10.0kb downstream 15933 true chr5: 12343441-12359373 Medicago truncatula
Medtr5g029470 10.0kb downstream 10.0kb downstream 10000 false chr5: 12349374-12359373 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305542 5265 Fabidae View MSA
124060556 5270 Rosid View MSA
123746843 5271 Pentapetalae View MSA
122791651 5272 Eudicot View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.1       Low
cufflinks 1.736       High
cufflinks 1.233        
cufflinks 0.142       Low
cufflinks 1.526       High
cufflinks 0.505        
cufflinks 0.32        
cufflinks 1.029        
cufflinks 0.282        

0 Strain