Gene : Medtr5g029070 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24078:SF193 - DNAJ HOMOLOG SUBFAMILY C MEMBER 2 Description:  DUF3444 domain protein
Genomic Order:  1717 Name:  ? Medtr5g029070
Secondary Identifier:  ? PAC:31090561
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g029070 0.5kb upstream 0.5kb upstream 6605 true chr5: 12144883-12151487 Medicago truncatula
Medtr5g029070 0.5kb upstream 0.5kb upstream 500 false chr5: 12144883-12145382 Medicago truncatula
Medtr5g029070 0.5kb downstream 0.5kb downstream 6605 true chr5: 12145383-12151987 Medicago truncatula
Medtr5g029070 0.5kb downstream 0.5kb downstream 500 false chr5: 12151488-12151987 Medicago truncatula
Medtr5g029070 1.0kb upstream 1.0kb upstream 7105 true chr5: 12144383-12151487 Medicago truncatula
Medtr5g029070 1.0kb upstream 1.0kb upstream 1000 false chr5: 12144383-12145382 Medicago truncatula
Medtr5g029070 1.0kb downstream 1.0kb downstream 7105 true chr5: 12145383-12152487 Medicago truncatula
Medtr5g029070 1.0kb downstream 1.0kb downstream 1000 false chr5: 12151488-12152487 Medicago truncatula
Medtr5g029070 2.0kb upstream 2.0kb upstream 8105 true chr5: 12143383-12151487 Medicago truncatula
Medtr5g029070 2.0kb upstream 2.0kb upstream 2000 false chr5: 12143383-12145382 Medicago truncatula
Medtr5g029070 2.0kb downstream 2.0kb downstream 8105 true chr5: 12145383-12153487 Medicago truncatula
Medtr5g029070 2.0kb downstream 2.0kb downstream 2000 false chr5: 12151488-12153487 Medicago truncatula
Medtr5g029070 5.0kb upstream 5.0kb upstream 11105 true chr5: 12140383-12151487 Medicago truncatula
Medtr5g029070 5.0kb upstream 5.0kb upstream 5000 false chr5: 12140383-12145382 Medicago truncatula
Medtr5g029070 5.0kb downstream 5.0kb downstream 11105 true chr5: 12145383-12156487 Medicago truncatula
Medtr5g029070 5.0kb downstream 5.0kb downstream 5000 false chr5: 12151488-12156487 Medicago truncatula
Medtr5g029070 10.0kb upstream 10.0kb upstream 16105 true chr5: 12135383-12151487 Medicago truncatula
Medtr5g029070 10.0kb upstream 10.0kb upstream 10000 false chr5: 12135383-12145382 Medicago truncatula
Medtr5g029070 10.0kb downstream 10.0kb downstream 16105 true chr5: 12145383-12161487 Medicago truncatula
Medtr5g029070 10.0kb downstream 10.0kb downstream 10000 false chr5: 12151488-12161487 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300435 5265 Fabidae View MSA
124068520 5270 Rosid View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.549       High
cufflinks 0.926        
cufflinks 1.099        
cufflinks 0.417       Low
cufflinks 1.237        
cufflinks 0.54        
cufflinks 0.579        
cufflinks 0.837        
cufflinks 0.367       Low

0 Strain