Gene : Medtr5g029590 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Description:  plastid fibrillin
Genomic Order:  1747 Name:  ? Medtr5g029590
Secondary Identifier:  ? PAC:31091705
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g029590 0.5kb upstream 0.5kb upstream 4907 true chr5: 12423834-12428740 Medicago truncatula
Medtr5g029590 0.5kb upstream 0.5kb upstream 500 false chr5: 12423834-12424333 Medicago truncatula
Medtr5g029590 0.5kb downstream 0.5kb downstream 4907 true chr5: 12424334-12429240 Medicago truncatula
Medtr5g029590 0.5kb downstream 0.5kb downstream 500 false chr5: 12428741-12429240 Medicago truncatula
Medtr5g029590 1.0kb upstream 1.0kb upstream 5407 true chr5: 12423334-12428740 Medicago truncatula
Medtr5g029590 1.0kb upstream 1.0kb upstream 1000 false chr5: 12423334-12424333 Medicago truncatula
Medtr5g029590 1.0kb downstream 1.0kb downstream 5407 true chr5: 12424334-12429740 Medicago truncatula
Medtr5g029590 1.0kb downstream 1.0kb downstream 1000 false chr5: 12428741-12429740 Medicago truncatula
Medtr5g029590 2.0kb upstream 2.0kb upstream 6407 true chr5: 12422334-12428740 Medicago truncatula
Medtr5g029590 2.0kb upstream 2.0kb upstream 2000 false chr5: 12422334-12424333 Medicago truncatula
Medtr5g029590 2.0kb downstream 2.0kb downstream 6407 true chr5: 12424334-12430740 Medicago truncatula
Medtr5g029590 2.0kb downstream 2.0kb downstream 2000 false chr5: 12428741-12430740 Medicago truncatula
Medtr5g029590 5.0kb upstream 5.0kb upstream 9407 true chr5: 12419334-12428740 Medicago truncatula
Medtr5g029590 5.0kb upstream 5.0kb upstream 5000 false chr5: 12419334-12424333 Medicago truncatula
Medtr5g029590 5.0kb downstream 5.0kb downstream 9407 true chr5: 12424334-12433740 Medicago truncatula
Medtr5g029590 5.0kb downstream 5.0kb downstream 5000 false chr5: 12428741-12433740 Medicago truncatula
Medtr5g029590 10.0kb upstream 10.0kb upstream 14407 true chr5: 12414334-12428740 Medicago truncatula
Medtr5g029590 10.0kb upstream 10.0kb upstream 10000 false chr5: 12414334-12424333 Medicago truncatula
Medtr5g029590 10.0kb downstream 10.0kb downstream 14407 true chr5: 12424334-12438740 Medicago truncatula
Medtr5g029590 10.0kb downstream 10.0kb downstream 10000 false chr5: 12428741-12438740 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306951 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.524       Low
cufflinks 20.416     High  
cufflinks 18.377     High  
cufflinks 8.995     High  
cufflinks 23.884     High High
cufflinks 9.294        
cufflinks 2.883       Low
cufflinks 19.442     High  
cufflinks 3.713        

0 Strain