Gene : Medtr5g030870 M. truncatula Mt4.0v1
Defline:  (1 of 12) PF12734 - Cysteine-rich TM module stress tolerance (CYSTM) Description:  cysteine-rich TM module stress tolerance protein
Genomic Order:  1840 Name:  ? Medtr5g030870
Secondary Identifier:  ? PAC:31087167
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g030870 0.5kb upstream 0.5kb upstream 1962 true chr5: 13201139-13203100 Medicago truncatula
Medtr5g030870 0.5kb upstream 0.5kb upstream 500 false chr5: 13201139-13201638 Medicago truncatula
Medtr5g030870 0.5kb downstream 0.5kb downstream 1962 true chr5: 13201639-13203600 Medicago truncatula
Medtr5g030870 0.5kb downstream 0.5kb downstream 500 false chr5: 13203101-13203600 Medicago truncatula
Medtr5g030870 1.0kb upstream 1.0kb upstream 2462 true chr5: 13200639-13203100 Medicago truncatula
Medtr5g030870 1.0kb upstream 1.0kb upstream 1000 false chr5: 13200639-13201638 Medicago truncatula
Medtr5g030870 1.0kb downstream 1.0kb downstream 2462 true chr5: 13201639-13204100 Medicago truncatula
Medtr5g030870 1.0kb downstream 1.0kb downstream 1000 false chr5: 13203101-13204100 Medicago truncatula
Medtr5g030870 2.0kb upstream 2.0kb upstream 3462 true chr5: 13199639-13203100 Medicago truncatula
Medtr5g030870 2.0kb upstream 2.0kb upstream 2000 false chr5: 13199639-13201638 Medicago truncatula
Medtr5g030870 2.0kb downstream 2.0kb downstream 3462 true chr5: 13201639-13205100 Medicago truncatula
Medtr5g030870 2.0kb downstream 2.0kb downstream 2000 false chr5: 13203101-13205100 Medicago truncatula
Medtr5g030870 5.0kb upstream 5.0kb upstream 6462 true chr5: 13196639-13203100 Medicago truncatula
Medtr5g030870 5.0kb upstream 5.0kb upstream 5000 false chr5: 13196639-13201638 Medicago truncatula
Medtr5g030870 5.0kb downstream 5.0kb downstream 6462 true chr5: 13201639-13208100 Medicago truncatula
Medtr5g030870 5.0kb downstream 5.0kb downstream 5000 false chr5: 13203101-13208100 Medicago truncatula
Medtr5g030870 10.0kb upstream 10.0kb upstream 11462 true chr5: 13191639-13203100 Medicago truncatula
Medtr5g030870 10.0kb upstream 10.0kb upstream 10000 false chr5: 13191639-13201638 Medicago truncatula
Medtr5g030870 10.0kb downstream 10.0kb downstream 11462 true chr5: 13201639-13213100 Medicago truncatula
Medtr5g030870 10.0kb downstream 10.0kb downstream 10000 false chr5: 13203101-13213100 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026920 5273 Angiosperm View MSA
122311265 5265 Fabidae View MSA
124069872 5270 Rosid View MSA
123744649 5271 Pentapetalae View MSA
122794979 5272 Eudicot View MSA
121348545 5274 Embryophyte View MSA
123380908 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.743        
cufflinks 4.47        
cufflinks 5.625        
cufflinks 2.487       Low
cufflinks 3.123        
cufflinks 9.12       High
cufflinks 16.296     High High
cufflinks 4.449        
cufflinks 3.86        

0 Strain