Gene : Medtr5g030360 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Description:  ubiquitin carboxyl-terminal hydrolase-like protein
Genomic Order:  1807 Name:  ? Medtr5g030360
Secondary Identifier:  ? PAC:31088352
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g030360 0.5kb upstream 0.5kb upstream 4690 true chr5: 12814771-12819460 Medicago truncatula
Medtr5g030360 0.5kb upstream 0.5kb upstream 500 false chr5: 12818961-12819460 Medicago truncatula
Medtr5g030360 0.5kb downstream 0.5kb downstream 4690 true chr5: 12814271-12818960 Medicago truncatula
Medtr5g030360 0.5kb downstream 0.5kb downstream 500 false chr5: 12814271-12814770 Medicago truncatula
Medtr5g030360 1.0kb upstream 1.0kb upstream 5190 true chr5: 12814771-12819960 Medicago truncatula
Medtr5g030360 1.0kb upstream 1.0kb upstream 1000 false chr5: 12818961-12819960 Medicago truncatula
Medtr5g030360 1.0kb downstream 1.0kb downstream 5190 true chr5: 12813771-12818960 Medicago truncatula
Medtr5g030360 1.0kb downstream 1.0kb downstream 1000 false chr5: 12813771-12814770 Medicago truncatula
Medtr5g030360 2.0kb upstream 2.0kb upstream 6190 true chr5: 12814771-12820960 Medicago truncatula
Medtr5g030360 2.0kb upstream 2.0kb upstream 2000 false chr5: 12818961-12820960 Medicago truncatula
Medtr5g030360 2.0kb downstream 2.0kb downstream 6190 true chr5: 12812771-12818960 Medicago truncatula
Medtr5g030360 2.0kb downstream 2.0kb downstream 2000 false chr5: 12812771-12814770 Medicago truncatula
Medtr5g030360 5.0kb upstream 5.0kb upstream 9190 true chr5: 12814771-12823960 Medicago truncatula
Medtr5g030360 5.0kb upstream 5.0kb upstream 5000 false chr5: 12818961-12823960 Medicago truncatula
Medtr5g030360 5.0kb downstream 5.0kb downstream 9190 true chr5: 12809771-12818960 Medicago truncatula
Medtr5g030360 5.0kb downstream 5.0kb downstream 5000 false chr5: 12809771-12814770 Medicago truncatula
Medtr5g030360 10.0kb upstream 10.0kb upstream 14190 true chr5: 12814771-12828960 Medicago truncatula
Medtr5g030360 10.0kb upstream 10.0kb upstream 10000 false chr5: 12818961-12828960 Medicago truncatula
Medtr5g030360 10.0kb downstream 10.0kb downstream 14190 true chr5: 12804771-12818960 Medicago truncatula
Medtr5g030360 10.0kb downstream 10.0kb downstream 10000 false chr5: 12804771-12814770 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306271 5265 Fabidae View MSA
124064624 5270 Rosid View MSA
123747010 5271 Pentapetalae View MSA
122793778 5272 Eudicot View MSA
122046494 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.356       Low
cufflinks 0.688        
cufflinks 0.67        
cufflinks 0.587        
cufflinks 0.613        
cufflinks 0.452       Low
cufflinks 0.736        
cufflinks 0.675        
cufflinks 0.716        

0 Strain