Gene : Medtr5g030490 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1817
Name:  ? Medtr5g030490 Secondary Identifier:  ? PAC:31090645
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g030490 0.5kb upstream 0.5kb upstream 926 true chr5: 12906785-12907710 Medicago truncatula
Medtr5g030490 0.5kb upstream 0.5kb upstream 500 false chr5: 12906785-12907284 Medicago truncatula
Medtr5g030490 0.5kb downstream 0.5kb downstream 926 true chr5: 12907285-12908210 Medicago truncatula
Medtr5g030490 0.5kb downstream 0.5kb downstream 500 false chr5: 12907711-12908210 Medicago truncatula
Medtr5g030490 1.0kb upstream 1.0kb upstream 1426 true chr5: 12906285-12907710 Medicago truncatula
Medtr5g030490 1.0kb upstream 1.0kb upstream 1000 false chr5: 12906285-12907284 Medicago truncatula
Medtr5g030490 1.0kb downstream 1.0kb downstream 1426 true chr5: 12907285-12908710 Medicago truncatula
Medtr5g030490 1.0kb downstream 1.0kb downstream 1000 false chr5: 12907711-12908710 Medicago truncatula
Medtr5g030490 2.0kb upstream 2.0kb upstream 2426 true chr5: 12905285-12907710 Medicago truncatula
Medtr5g030490 2.0kb upstream 2.0kb upstream 2000 false chr5: 12905285-12907284 Medicago truncatula
Medtr5g030490 2.0kb downstream 2.0kb downstream 2426 true chr5: 12907285-12909710 Medicago truncatula
Medtr5g030490 2.0kb downstream 2.0kb downstream 2000 false chr5: 12907711-12909710 Medicago truncatula
Medtr5g030490 5.0kb upstream 5.0kb upstream 5426 true chr5: 12902285-12907710 Medicago truncatula
Medtr5g030490 5.0kb upstream 5.0kb upstream 5000 false chr5: 12902285-12907284 Medicago truncatula
Medtr5g030490 5.0kb downstream 5.0kb downstream 5426 true chr5: 12907285-12912710 Medicago truncatula
Medtr5g030490 5.0kb downstream 5.0kb downstream 5000 false chr5: 12907711-12912710 Medicago truncatula
Medtr5g030490 10.0kb upstream 10.0kb upstream 10426 true chr5: 12897285-12907710 Medicago truncatula
Medtr5g030490 10.0kb upstream 10.0kb upstream 10000 false chr5: 12897285-12907284 Medicago truncatula
Medtr5g030490 10.0kb downstream 10.0kb downstream 10426 true chr5: 12907285-12917710 Medicago truncatula
Medtr5g030490 10.0kb downstream 10.0kb downstream 10000 false chr5: 12907711-12917710 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122264669 5265 Fabidae Singleton cluster - no MSA
124072573 5270 Rosid View MSA
123748035 5271 Pentapetalae View MSA
122772407 5272 Eudicot View MSA
122044935 5273 Angiosperm View MSA
121310364 5274 Embryophyte View MSA
123347866 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  

0 Strain