Gene : Medtr5g032080 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Description:  viral A-type inclusion protein, putative
Genomic Order:  1919 Name:  ? Medtr5g032080
Secondary Identifier:  ? PAC:31090865
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g032080 0.5kb upstream 0.5kb upstream 2663 true chr5: 13766734-13769396 Medicago truncatula
Medtr5g032080 0.5kb upstream 0.5kb upstream 500 false chr5: 13766734-13767233 Medicago truncatula
Medtr5g032080 0.5kb downstream 0.5kb downstream 2663 true chr5: 13767234-13769896 Medicago truncatula
Medtr5g032080 0.5kb downstream 0.5kb downstream 500 false chr5: 13769397-13769896 Medicago truncatula
Medtr5g032080 1.0kb upstream 1.0kb upstream 3163 true chr5: 13766234-13769396 Medicago truncatula
Medtr5g032080 1.0kb upstream 1.0kb upstream 1000 false chr5: 13766234-13767233 Medicago truncatula
Medtr5g032080 1.0kb downstream 1.0kb downstream 3163 true chr5: 13767234-13770396 Medicago truncatula
Medtr5g032080 1.0kb downstream 1.0kb downstream 1000 false chr5: 13769397-13770396 Medicago truncatula
Medtr5g032080 2.0kb upstream 2.0kb upstream 4163 true chr5: 13765234-13769396 Medicago truncatula
Medtr5g032080 2.0kb upstream 2.0kb upstream 2000 false chr5: 13765234-13767233 Medicago truncatula
Medtr5g032080 2.0kb downstream 2.0kb downstream 4163 true chr5: 13767234-13771396 Medicago truncatula
Medtr5g032080 2.0kb downstream 2.0kb downstream 2000 false chr5: 13769397-13771396 Medicago truncatula
Medtr5g032080 5.0kb upstream 5.0kb upstream 7163 true chr5: 13762234-13769396 Medicago truncatula
Medtr5g032080 5.0kb upstream 5.0kb upstream 5000 false chr5: 13762234-13767233 Medicago truncatula
Medtr5g032080 5.0kb downstream 5.0kb downstream 7163 true chr5: 13767234-13774396 Medicago truncatula
Medtr5g032080 5.0kb downstream 5.0kb downstream 5000 false chr5: 13769397-13774396 Medicago truncatula
Medtr5g032080 10.0kb upstream 10.0kb upstream 12163 true chr5: 13757234-13769396 Medicago truncatula
Medtr5g032080 10.0kb upstream 10.0kb upstream 10000 false chr5: 13757234-13767233 Medicago truncatula
Medtr5g032080 10.0kb downstream 10.0kb downstream 12163 true chr5: 13767234-13779396 Medicago truncatula
Medtr5g032080 10.0kb downstream 10.0kb downstream 10000 false chr5: 13769397-13779396 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122297133 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain