Gene : Medtr5g032150 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Description:  MADS-box transcription factor
Genomic Order:  1924 Name:  ? Medtr5g032150
Secondary Identifier:  ? PAC:31089510
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g032150 0.5kb upstream 0.5kb upstream 3408 true chr5: 13808671-13812078 Medicago truncatula
Medtr5g032150 0.5kb upstream 0.5kb upstream 500 false chr5: 13811579-13812078 Medicago truncatula
Medtr5g032150 0.5kb downstream 0.5kb downstream 3408 true chr5: 13808171-13811578 Medicago truncatula
Medtr5g032150 0.5kb downstream 0.5kb downstream 500 false chr5: 13808171-13808670 Medicago truncatula
Medtr5g032150 1.0kb upstream 1.0kb upstream 3908 true chr5: 13808671-13812578 Medicago truncatula
Medtr5g032150 1.0kb upstream 1.0kb upstream 1000 false chr5: 13811579-13812578 Medicago truncatula
Medtr5g032150 1.0kb downstream 1.0kb downstream 3908 true chr5: 13807671-13811578 Medicago truncatula
Medtr5g032150 1.0kb downstream 1.0kb downstream 1000 false chr5: 13807671-13808670 Medicago truncatula
Medtr5g032150 2.0kb upstream 2.0kb upstream 4908 true chr5: 13808671-13813578 Medicago truncatula
Medtr5g032150 2.0kb upstream 2.0kb upstream 2000 false chr5: 13811579-13813578 Medicago truncatula
Medtr5g032150 2.0kb downstream 2.0kb downstream 4908 true chr5: 13806671-13811578 Medicago truncatula
Medtr5g032150 2.0kb downstream 2.0kb downstream 2000 false chr5: 13806671-13808670 Medicago truncatula
Medtr5g032150 5.0kb upstream 5.0kb upstream 7908 true chr5: 13808671-13816578 Medicago truncatula
Medtr5g032150 5.0kb upstream 5.0kb upstream 5000 false chr5: 13811579-13816578 Medicago truncatula
Medtr5g032150 5.0kb downstream 5.0kb downstream 7908 true chr5: 13803671-13811578 Medicago truncatula
Medtr5g032150 5.0kb downstream 5.0kb downstream 5000 false chr5: 13803671-13808670 Medicago truncatula
Medtr5g032150 10.0kb upstream 10.0kb upstream 12908 true chr5: 13808671-13821578 Medicago truncatula
Medtr5g032150 10.0kb upstream 10.0kb upstream 10000 false chr5: 13811579-13821578 Medicago truncatula
Medtr5g032150 10.0kb downstream 10.0kb downstream 12908 true chr5: 13798671-13811578 Medicago truncatula
Medtr5g032150 10.0kb downstream 10.0kb downstream 10000 false chr5: 13798671-13808670 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306643 5265 Fabidae View MSA
124071999 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.742       High
cufflinks 0.889        
cufflinks 0.7        
cufflinks 0.191        
cufflinks 0.919        
cufflinks 0.026     Low Low
cufflinks 0.22        
cufflinks 0.586        
cufflinks 0.243        

0 Strain