Gene : Medtr5g031880 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32467:SF33 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6-RELATED Description:  AP2-like ethylene-responsive transcription factor
Genomic Order:  1906 Name:  ? Medtr5g031880
Secondary Identifier:  ? PAC:31091236
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g031880 0.5kb upstream 0.5kb upstream 4813 true chr5: 13680655-13685467 Medicago truncatula
Medtr5g031880 0.5kb upstream 0.5kb upstream 500 false chr5: 13684968-13685467 Medicago truncatula
Medtr5g031880 0.5kb downstream 0.5kb downstream 4813 true chr5: 13680155-13684967 Medicago truncatula
Medtr5g031880 0.5kb downstream 0.5kb downstream 500 false chr5: 13680155-13680654 Medicago truncatula
Medtr5g031880 1.0kb upstream 1.0kb upstream 5313 true chr5: 13680655-13685967 Medicago truncatula
Medtr5g031880 1.0kb upstream 1.0kb upstream 1000 false chr5: 13684968-13685967 Medicago truncatula
Medtr5g031880 1.0kb downstream 1.0kb downstream 5313 true chr5: 13679655-13684967 Medicago truncatula
Medtr5g031880 1.0kb downstream 1.0kb downstream 1000 false chr5: 13679655-13680654 Medicago truncatula
Medtr5g031880 2.0kb upstream 2.0kb upstream 6313 true chr5: 13680655-13686967 Medicago truncatula
Medtr5g031880 2.0kb upstream 2.0kb upstream 2000 false chr5: 13684968-13686967 Medicago truncatula
Medtr5g031880 2.0kb downstream 2.0kb downstream 6313 true chr5: 13678655-13684967 Medicago truncatula
Medtr5g031880 2.0kb downstream 2.0kb downstream 2000 false chr5: 13678655-13680654 Medicago truncatula
Medtr5g031880 5.0kb upstream 5.0kb upstream 9313 true chr5: 13680655-13689967 Medicago truncatula
Medtr5g031880 5.0kb upstream 5.0kb upstream 5000 false chr5: 13684968-13689967 Medicago truncatula
Medtr5g031880 5.0kb downstream 5.0kb downstream 9313 true chr5: 13675655-13684967 Medicago truncatula
Medtr5g031880 5.0kb downstream 5.0kb downstream 5000 false chr5: 13675655-13680654 Medicago truncatula
Medtr5g031880 10.0kb upstream 10.0kb upstream 14313 true chr5: 13680655-13694967 Medicago truncatula
Medtr5g031880 10.0kb upstream 10.0kb upstream 10000 false chr5: 13684968-13694967 Medicago truncatula
Medtr5g031880 10.0kb downstream 10.0kb downstream 14313 true chr5: 13670655-13684967 Medicago truncatula
Medtr5g031880 10.0kb downstream 10.0kb downstream 10000 false chr5: 13670655-13680654 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122303735 5265 Fabidae View MSA
124061008 5270 Rosid View MSA
123736704 5271 Pentapetalae View MSA
122790985 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.668       High
cufflinks 0.029     Low Low
cufflinks 0.066     Low  
cufflinks 1.362        
cufflinks 0.056     Low  
cufflinks 1.164        
cufflinks 2.316        
cufflinks 0.081        
cufflinks 1.697        

0 Strain