Gene : Medtr5g033960 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0004 - Ubiquitin/40S ribosomal protein S27a fusion Description:  ubiquitin-40S ribosomal S27a-like protein
Genomic Order:  2042 Name:  ? Medtr5g033960
Secondary Identifier:  ? PAC:31090430
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033960 0.5kb upstream 0.5kb upstream 1261 true chr5: 14676493-14677753 Medicago truncatula
Medtr5g033960 0.5kb upstream 0.5kb upstream 500 false chr5: 14676493-14676992 Medicago truncatula
Medtr5g033960 0.5kb downstream 0.5kb downstream 1261 true chr5: 14676993-14678253 Medicago truncatula
Medtr5g033960 0.5kb downstream 0.5kb downstream 500 false chr5: 14677754-14678253 Medicago truncatula
Medtr5g033960 1.0kb upstream 1.0kb upstream 1761 true chr5: 14675993-14677753 Medicago truncatula
Medtr5g033960 1.0kb upstream 1.0kb upstream 1000 false chr5: 14675993-14676992 Medicago truncatula
Medtr5g033960 1.0kb downstream 1.0kb downstream 1761 true chr5: 14676993-14678753 Medicago truncatula
Medtr5g033960 1.0kb downstream 1.0kb downstream 1000 false chr5: 14677754-14678753 Medicago truncatula
Medtr5g033960 2.0kb upstream 2.0kb upstream 2761 true chr5: 14674993-14677753 Medicago truncatula
Medtr5g033960 2.0kb upstream 2.0kb upstream 2000 false chr5: 14674993-14676992 Medicago truncatula
Medtr5g033960 2.0kb downstream 2.0kb downstream 2761 true chr5: 14676993-14679753 Medicago truncatula
Medtr5g033960 2.0kb downstream 2.0kb downstream 2000 false chr5: 14677754-14679753 Medicago truncatula
Medtr5g033960 5.0kb upstream 5.0kb upstream 5761 true chr5: 14671993-14677753 Medicago truncatula
Medtr5g033960 5.0kb upstream 5.0kb upstream 5000 false chr5: 14671993-14676992 Medicago truncatula
Medtr5g033960 5.0kb downstream 5.0kb downstream 5761 true chr5: 14676993-14682753 Medicago truncatula
Medtr5g033960 5.0kb downstream 5.0kb downstream 5000 false chr5: 14677754-14682753 Medicago truncatula
Medtr5g033960 10.0kb upstream 10.0kb upstream 10761 true chr5: 14666993-14677753 Medicago truncatula
Medtr5g033960 10.0kb upstream 10.0kb upstream 10000 false chr5: 14666993-14676992 Medicago truncatula
Medtr5g033960 10.0kb downstream 10.0kb downstream 10761 true chr5: 14676993-14687753 Medicago truncatula
Medtr5g033960 10.0kb downstream 10.0kb downstream 10000 false chr5: 14677754-14687753 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306613 5265 Fabidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.971     High  
cufflinks 79.537     High  
cufflinks 63.645     High Low
cufflinks 322.168     High High
cufflinks 121.982     High  
cufflinks 145.285     High  
cufflinks 115.409     High  
cufflinks 86.313     High  
cufflinks 236.72     High High

0 Strain