Gene : Medtr5g032380 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  ubiquitin carboxy-terminal hydrolase
Genomic Order:  1939 Name:  ? Medtr5g032380
Secondary Identifier:  ? PAC:31089865
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g032380 0.5kb upstream 0.5kb upstream 9491 true chr5: 13894717-13904207 Medicago truncatula
Medtr5g032380 0.5kb upstream 0.5kb upstream 500 false chr5: 13903708-13904207 Medicago truncatula
Medtr5g032380 0.5kb downstream 0.5kb downstream 9491 true chr5: 13894217-13903707 Medicago truncatula
Medtr5g032380 0.5kb downstream 0.5kb downstream 500 false chr5: 13894217-13894716 Medicago truncatula
Medtr5g032380 1.0kb upstream 1.0kb upstream 9991 true chr5: 13894717-13904707 Medicago truncatula
Medtr5g032380 1.0kb upstream 1.0kb upstream 1000 false chr5: 13903708-13904707 Medicago truncatula
Medtr5g032380 1.0kb downstream 1.0kb downstream 9991 true chr5: 13893717-13903707 Medicago truncatula
Medtr5g032380 1.0kb downstream 1.0kb downstream 1000 false chr5: 13893717-13894716 Medicago truncatula
Medtr5g032380 2.0kb upstream 2.0kb upstream 10991 true chr5: 13894717-13905707 Medicago truncatula
Medtr5g032380 2.0kb upstream 2.0kb upstream 2000 false chr5: 13903708-13905707 Medicago truncatula
Medtr5g032380 2.0kb downstream 2.0kb downstream 10991 true chr5: 13892717-13903707 Medicago truncatula
Medtr5g032380 2.0kb downstream 2.0kb downstream 2000 false chr5: 13892717-13894716 Medicago truncatula
Medtr5g032380 5.0kb upstream 5.0kb upstream 13991 true chr5: 13894717-13908707 Medicago truncatula
Medtr5g032380 5.0kb upstream 5.0kb upstream 5000 false chr5: 13903708-13908707 Medicago truncatula
Medtr5g032380 5.0kb downstream 5.0kb downstream 13991 true chr5: 13889717-13903707 Medicago truncatula
Medtr5g032380 5.0kb downstream 5.0kb downstream 5000 false chr5: 13889717-13894716 Medicago truncatula
Medtr5g032380 10.0kb upstream 10.0kb upstream 18991 true chr5: 13894717-13913707 Medicago truncatula
Medtr5g032380 10.0kb upstream 10.0kb upstream 10000 false chr5: 13903708-13913707 Medicago truncatula
Medtr5g032380 10.0kb downstream 10.0kb downstream 18991 true chr5: 13884717-13903707 Medicago truncatula
Medtr5g032380 10.0kb downstream 10.0kb downstream 10000 false chr5: 13884717-13894716 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309003 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.284       High
cufflinks 1.739        
cufflinks 2.353        
cufflinks 0.192       Low
cufflinks 2.398        
cufflinks 0.225       Low
cufflinks 0.623        
cufflinks 1.9        
cufflinks 0.553        

0 Strain