Gene : Medtr5g033210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00646//PF08238 - F-box domain (F-box) // Sel1 repeat (Sel1) Description:  F-box plant-like protein
Genomic Order:  1992 Name:  ? Medtr5g033210
Secondary Identifier:  ? PAC:31088702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033210 0.5kb upstream 0.5kb upstream 4686 true chr5: 14311893-14316578 Medicago truncatula
Medtr5g033210 0.5kb upstream 0.5kb upstream 500 false chr5: 14316079-14316578 Medicago truncatula
Medtr5g033210 0.5kb downstream 0.5kb downstream 4686 true chr5: 14311393-14316078 Medicago truncatula
Medtr5g033210 0.5kb downstream 0.5kb downstream 500 false chr5: 14311393-14311892 Medicago truncatula
Medtr5g033210 1.0kb upstream 1.0kb upstream 5186 true chr5: 14311893-14317078 Medicago truncatula
Medtr5g033210 1.0kb upstream 1.0kb upstream 1000 false chr5: 14316079-14317078 Medicago truncatula
Medtr5g033210 1.0kb downstream 1.0kb downstream 5186 true chr5: 14310893-14316078 Medicago truncatula
Medtr5g033210 1.0kb downstream 1.0kb downstream 1000 false chr5: 14310893-14311892 Medicago truncatula
Medtr5g033210 2.0kb upstream 2.0kb upstream 6186 true chr5: 14311893-14318078 Medicago truncatula
Medtr5g033210 2.0kb upstream 2.0kb upstream 2000 false chr5: 14316079-14318078 Medicago truncatula
Medtr5g033210 2.0kb downstream 2.0kb downstream 6186 true chr5: 14309893-14316078 Medicago truncatula
Medtr5g033210 2.0kb downstream 2.0kb downstream 2000 false chr5: 14309893-14311892 Medicago truncatula
Medtr5g033210 5.0kb upstream 5.0kb upstream 9186 true chr5: 14311893-14321078 Medicago truncatula
Medtr5g033210 5.0kb upstream 5.0kb upstream 5000 false chr5: 14316079-14321078 Medicago truncatula
Medtr5g033210 5.0kb downstream 5.0kb downstream 9186 true chr5: 14306893-14316078 Medicago truncatula
Medtr5g033210 5.0kb downstream 5.0kb downstream 5000 false chr5: 14306893-14311892 Medicago truncatula
Medtr5g033210 10.0kb upstream 10.0kb upstream 14186 true chr5: 14311893-14326078 Medicago truncatula
Medtr5g033210 10.0kb upstream 10.0kb upstream 10000 false chr5: 14316079-14326078 Medicago truncatula
Medtr5g033210 10.0kb downstream 10.0kb downstream 14186 true chr5: 14301893-14316078 Medicago truncatula
Medtr5g033210 10.0kb downstream 10.0kb downstream 10000 false chr5: 14301893-14311892 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308508 5265 Fabidae View MSA
124063984 5270 Rosid View MSA
123747474 5271 Pentapetalae View MSA
122790025 5272 Eudicot View MSA
122044811 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121345855 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.651       Low
cufflinks 2.318        
cufflinks 2.363        
cufflinks 3.419       High
cufflinks 1.846        
cufflinks 2.25        
cufflinks 1.34        
cufflinks 2.059        
cufflinks 1.767        

0 Strain