Gene : Medtr5g033080 M. truncatula Mt4.0v1
Defline:  (1 of 83) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Description:  ABC transporter B family protein
Genomic Order:  1983 Name:  ? Medtr5g033080
Secondary Identifier:  ? PAC:31091680
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033080 0.5kb upstream 0.5kb upstream 8358 true chr5: 14250724-14259081 Medicago truncatula
Medtr5g033080 0.5kb upstream 0.5kb upstream 500 false chr5: 14258582-14259081 Medicago truncatula
Medtr5g033080 0.5kb downstream 0.5kb downstream 8358 true chr5: 14250224-14258581 Medicago truncatula
Medtr5g033080 0.5kb downstream 0.5kb downstream 500 false chr5: 14250224-14250723 Medicago truncatula
Medtr5g033080 1.0kb upstream 1.0kb upstream 8858 true chr5: 14250724-14259581 Medicago truncatula
Medtr5g033080 1.0kb upstream 1.0kb upstream 1000 false chr5: 14258582-14259581 Medicago truncatula
Medtr5g033080 1.0kb downstream 1.0kb downstream 8858 true chr5: 14249724-14258581 Medicago truncatula
Medtr5g033080 1.0kb downstream 1.0kb downstream 1000 false chr5: 14249724-14250723 Medicago truncatula
Medtr5g033080 2.0kb upstream 2.0kb upstream 9858 true chr5: 14250724-14260581 Medicago truncatula
Medtr5g033080 2.0kb upstream 2.0kb upstream 2000 false chr5: 14258582-14260581 Medicago truncatula
Medtr5g033080 2.0kb downstream 2.0kb downstream 9858 true chr5: 14248724-14258581 Medicago truncatula
Medtr5g033080 2.0kb downstream 2.0kb downstream 2000 false chr5: 14248724-14250723 Medicago truncatula
Medtr5g033080 5.0kb upstream 5.0kb upstream 12858 true chr5: 14250724-14263581 Medicago truncatula
Medtr5g033080 5.0kb upstream 5.0kb upstream 5000 false chr5: 14258582-14263581 Medicago truncatula
Medtr5g033080 5.0kb downstream 5.0kb downstream 12858 true chr5: 14245724-14258581 Medicago truncatula
Medtr5g033080 5.0kb downstream 5.0kb downstream 5000 false chr5: 14245724-14250723 Medicago truncatula
Medtr5g033080 10.0kb upstream 10.0kb upstream 17858 true chr5: 14250724-14268581 Medicago truncatula
Medtr5g033080 10.0kb upstream 10.0kb upstream 10000 false chr5: 14258582-14268581 Medicago truncatula
Medtr5g033080 10.0kb downstream 10.0kb downstream 17858 true chr5: 14240724-14258581 Medicago truncatula
Medtr5g033080 10.0kb downstream 10.0kb downstream 10000 false chr5: 14240724-14250723 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299431 5265 Fabidae View MSA
124063192 5270 Rosid View MSA
123743062 5271 Pentapetalae View MSA
122793644 5272 Eudicot View MSA
122046260 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346944 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.09        
cufflinks 6.023       High
cufflinks 1.347        
cufflinks 0.018     Low Low
cufflinks 3.644        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 2.974        
cufflinks 0.059     Low  

0 Strain