Gene : Medtr5g033090 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Description:  60S ribosomal protein L27a-3
Genomic Order:  1984 Name:  ? Medtr5g033090
Secondary Identifier:  ? PAC:31085583
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033090 0.5kb upstream 0.5kb upstream 1382 true chr5: 14260328-14261709 Medicago truncatula
Medtr5g033090 0.5kb upstream 0.5kb upstream 500 false chr5: 14260328-14260827 Medicago truncatula
Medtr5g033090 0.5kb downstream 0.5kb downstream 1382 true chr5: 14260828-14262209 Medicago truncatula
Medtr5g033090 0.5kb downstream 0.5kb downstream 500 false chr5: 14261710-14262209 Medicago truncatula
Medtr5g033090 1.0kb upstream 1.0kb upstream 1882 true chr5: 14259828-14261709 Medicago truncatula
Medtr5g033090 1.0kb upstream 1.0kb upstream 1000 false chr5: 14259828-14260827 Medicago truncatula
Medtr5g033090 1.0kb downstream 1.0kb downstream 1882 true chr5: 14260828-14262709 Medicago truncatula
Medtr5g033090 1.0kb downstream 1.0kb downstream 1000 false chr5: 14261710-14262709 Medicago truncatula
Medtr5g033090 2.0kb upstream 2.0kb upstream 2882 true chr5: 14258828-14261709 Medicago truncatula
Medtr5g033090 2.0kb upstream 2.0kb upstream 2000 false chr5: 14258828-14260827 Medicago truncatula
Medtr5g033090 2.0kb downstream 2.0kb downstream 2882 true chr5: 14260828-14263709 Medicago truncatula
Medtr5g033090 2.0kb downstream 2.0kb downstream 2000 false chr5: 14261710-14263709 Medicago truncatula
Medtr5g033090 5.0kb upstream 5.0kb upstream 5882 true chr5: 14255828-14261709 Medicago truncatula
Medtr5g033090 5.0kb upstream 5.0kb upstream 5000 false chr5: 14255828-14260827 Medicago truncatula
Medtr5g033090 5.0kb downstream 5.0kb downstream 5882 true chr5: 14260828-14266709 Medicago truncatula
Medtr5g033090 5.0kb downstream 5.0kb downstream 5000 false chr5: 14261710-14266709 Medicago truncatula
Medtr5g033090 10.0kb upstream 10.0kb upstream 10882 true chr5: 14250828-14261709 Medicago truncatula
Medtr5g033090 10.0kb upstream 10.0kb upstream 10000 false chr5: 14250828-14260827 Medicago truncatula
Medtr5g033090 10.0kb downstream 10.0kb downstream 10882 true chr5: 14260828-14271709 Medicago truncatula
Medtr5g033090 10.0kb downstream 10.0kb downstream 10000 false chr5: 14261710-14271709 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.172     High Low
cufflinks 99.889     High  
cufflinks 95.472     High  
cufflinks 528.885     High High
cufflinks 162.114     High  
cufflinks 337.823     High High
cufflinks 132.294     High  
cufflinks 118.148     High  
cufflinks 283.296     High  

0 Strain