Gene : Medtr5g033720 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Description:  homeobox knotted-like protein
Genomic Order:  2028 Name:  ? Medtr5g033720
Secondary Identifier:  ? PAC:31091609
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033720 0.5kb upstream 0.5kb upstream 9088 true chr5: 14543912-14552999 Medicago truncatula
Medtr5g033720 0.5kb upstream 0.5kb upstream 500 false chr5: 14543912-14544411 Medicago truncatula
Medtr5g033720 0.5kb downstream 0.5kb downstream 9088 true chr5: 14544412-14553499 Medicago truncatula
Medtr5g033720 0.5kb downstream 0.5kb downstream 500 false chr5: 14553000-14553499 Medicago truncatula
Medtr5g033720 1.0kb upstream 1.0kb upstream 9588 true chr5: 14543412-14552999 Medicago truncatula
Medtr5g033720 1.0kb upstream 1.0kb upstream 1000 false chr5: 14543412-14544411 Medicago truncatula
Medtr5g033720 1.0kb downstream 1.0kb downstream 9588 true chr5: 14544412-14553999 Medicago truncatula
Medtr5g033720 1.0kb downstream 1.0kb downstream 1000 false chr5: 14553000-14553999 Medicago truncatula
Medtr5g033720 2.0kb upstream 2.0kb upstream 10588 true chr5: 14542412-14552999 Medicago truncatula
Medtr5g033720 2.0kb upstream 2.0kb upstream 2000 false chr5: 14542412-14544411 Medicago truncatula
Medtr5g033720 2.0kb downstream 2.0kb downstream 10588 true chr5: 14544412-14554999 Medicago truncatula
Medtr5g033720 2.0kb downstream 2.0kb downstream 2000 false chr5: 14553000-14554999 Medicago truncatula
Medtr5g033720 5.0kb upstream 5.0kb upstream 13588 true chr5: 14539412-14552999 Medicago truncatula
Medtr5g033720 5.0kb upstream 5.0kb upstream 5000 false chr5: 14539412-14544411 Medicago truncatula
Medtr5g033720 5.0kb downstream 5.0kb downstream 13588 true chr5: 14544412-14557999 Medicago truncatula
Medtr5g033720 5.0kb downstream 5.0kb downstream 5000 false chr5: 14553000-14557999 Medicago truncatula
Medtr5g033720 10.0kb upstream 10.0kb upstream 18588 true chr5: 14534412-14552999 Medicago truncatula
Medtr5g033720 10.0kb upstream 10.0kb upstream 10000 false chr5: 14534412-14544411 Medicago truncatula
Medtr5g033720 10.0kb downstream 10.0kb downstream 18588 true chr5: 14544412-14562999 Medicago truncatula
Medtr5g033720 10.0kb downstream 10.0kb downstream 10000 false chr5: 14553000-14562999 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310769 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low  
cufflinks 0.007     Low  
cufflinks 0.006     Low  
cufflinks 0.044     Low High
cufflinks 0.005     Low Low
cufflinks 0.007     Low  
cufflinks 0.031     Low  
cufflinks 0.014     Low  
cufflinks 0.088     Low High

0 Strain