Gene : Medtr5g033800 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32285:SF4 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  2033 Name:  ? Medtr5g033800
Secondary Identifier:  ? PAC:31091826
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033800 0.5kb upstream 0.5kb upstream 5420 true chr5: 14583624-14589043 Medicago truncatula
Medtr5g033800 0.5kb upstream 0.5kb upstream 500 false chr5: 14588544-14589043 Medicago truncatula
Medtr5g033800 0.5kb downstream 0.5kb downstream 5420 true chr5: 14583124-14588543 Medicago truncatula
Medtr5g033800 0.5kb downstream 0.5kb downstream 500 false chr5: 14583124-14583623 Medicago truncatula
Medtr5g033800 1.0kb upstream 1.0kb upstream 5920 true chr5: 14583624-14589543 Medicago truncatula
Medtr5g033800 1.0kb upstream 1.0kb upstream 1000 false chr5: 14588544-14589543 Medicago truncatula
Medtr5g033800 1.0kb downstream 1.0kb downstream 5920 true chr5: 14582624-14588543 Medicago truncatula
Medtr5g033800 1.0kb downstream 1.0kb downstream 1000 false chr5: 14582624-14583623 Medicago truncatula
Medtr5g033800 2.0kb upstream 2.0kb upstream 6920 true chr5: 14583624-14590543 Medicago truncatula
Medtr5g033800 2.0kb upstream 2.0kb upstream 2000 false chr5: 14588544-14590543 Medicago truncatula
Medtr5g033800 2.0kb downstream 2.0kb downstream 6920 true chr5: 14581624-14588543 Medicago truncatula
Medtr5g033800 2.0kb downstream 2.0kb downstream 2000 false chr5: 14581624-14583623 Medicago truncatula
Medtr5g033800 5.0kb upstream 5.0kb upstream 9920 true chr5: 14583624-14593543 Medicago truncatula
Medtr5g033800 5.0kb upstream 5.0kb upstream 5000 false chr5: 14588544-14593543 Medicago truncatula
Medtr5g033800 5.0kb downstream 5.0kb downstream 9920 true chr5: 14578624-14588543 Medicago truncatula
Medtr5g033800 5.0kb downstream 5.0kb downstream 5000 false chr5: 14578624-14583623 Medicago truncatula
Medtr5g033800 10.0kb upstream 10.0kb upstream 14920 true chr5: 14583624-14598543 Medicago truncatula
Medtr5g033800 10.0kb upstream 10.0kb upstream 10000 false chr5: 14588544-14598543 Medicago truncatula
Medtr5g033800 10.0kb downstream 10.0kb downstream 14920 true chr5: 14573624-14588543 Medicago truncatula
Medtr5g033800 10.0kb downstream 10.0kb downstream 10000 false chr5: 14573624-14583623 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310953 5265 Fabidae View MSA
124060625 5270 Rosid View MSA
123752142 5271 Pentapetalae View MSA
122792748 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0        
cufflinks 1.384        
cufflinks 0.999        
cufflinks 0.068     Low Low
cufflinks 2.154       High
cufflinks 0.038     Low Low
cufflinks 0.213        
cufflinks 1.182        
cufflinks 0.37        

0 Strain