Gene : Medtr5g087490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10192 - MOLYBDOPTERIN BIOSYNTHESIS PROTEIN Description:  molybdenum cofactor biosynthesis protein CNX1
Genomic Order:  4924 Name:  ? Medtr5g087490
Secondary Identifier:  ? PAC:31086734
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6823 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g087490 0.5kb upstream 0.5kb upstream 8907 true chr5: 37906738-37915644 Medicago truncatula
Medtr5g087490 0.5kb upstream 0.5kb upstream 500 false chr5: 37915145-37915644 Medicago truncatula
Medtr5g087490 0.5kb downstream 0.5kb downstream 8907 true chr5: 37906238-37915144 Medicago truncatula
Medtr5g087490 0.5kb downstream 0.5kb downstream 500 false chr5: 37906238-37906737 Medicago truncatula
Medtr5g087490 1.0kb upstream 1.0kb upstream 9407 true chr5: 37906738-37916144 Medicago truncatula
Medtr5g087490 1.0kb upstream 1.0kb upstream 1000 false chr5: 37915145-37916144 Medicago truncatula
Medtr5g087490 1.0kb downstream 1.0kb downstream 9407 true chr5: 37905738-37915144 Medicago truncatula
Medtr5g087490 1.0kb downstream 1.0kb downstream 1000 false chr5: 37905738-37906737 Medicago truncatula
Medtr5g087490 2.0kb upstream 2.0kb upstream 10407 true chr5: 37906738-37917144 Medicago truncatula
Medtr5g087490 2.0kb upstream 2.0kb upstream 2000 false chr5: 37915145-37917144 Medicago truncatula
Medtr5g087490 2.0kb downstream 2.0kb downstream 10407 true chr5: 37904738-37915144 Medicago truncatula
Medtr5g087490 2.0kb downstream 2.0kb downstream 2000 false chr5: 37904738-37906737 Medicago truncatula
Medtr5g087490 5.0kb upstream 5.0kb upstream 13407 true chr5: 37906738-37920144 Medicago truncatula
Medtr5g087490 5.0kb upstream 5.0kb upstream 5000 false chr5: 37915145-37920144 Medicago truncatula
Medtr5g087490 5.0kb downstream 5.0kb downstream 13407 true chr5: 37901738-37915144 Medicago truncatula
Medtr5g087490 5.0kb downstream 5.0kb downstream 5000 false chr5: 37901738-37906737 Medicago truncatula
Medtr5g087490 10.0kb upstream 10.0kb upstream 18407 true chr5: 37906738-37925144 Medicago truncatula
Medtr5g087490 10.0kb upstream 10.0kb upstream 10000 false chr5: 37915145-37925144 Medicago truncatula
Medtr5g087490 10.0kb downstream 10.0kb downstream 18407 true chr5: 37896738-37915144 Medicago truncatula
Medtr5g087490 10.0kb downstream 10.0kb downstream 10000 false chr5: 37896738-37906737 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305887 5265 Fabidae View MSA
124064569 5270 Rosid View MSA
123736843 5271 Pentapetalae View MSA
122786298 5272 Eudicot View MSA
122044086 5273 Angiosperm View MSA
121347061 5274 Embryophyte View MSA
123428395 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.11       High
cufflinks 1.126        
cufflinks 1.137        
cufflinks 0.638        
cufflinks 0.656        
cufflinks 0.486       Low
cufflinks 1.155        
cufflinks 0.564        
cufflinks 2.293       High

0 Strain