Gene : Medtr5g087410 M. truncatula Mt4.0v1
Defline:  (1 of 3) 1.2.3.1 - Aldehyde oxidase / Retinal oxidase Description:  indole-3-acetaldehyde oxidase
Genomic Order:  4918 Name:  ? Medtr5g087410
Secondary Identifier:  ? PAC:31086067
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g087410 0.5kb upstream 0.5kb upstream 8554 true chr5: 37872886-37881439 Medicago truncatula
Medtr5g087410 0.5kb upstream 0.5kb upstream 500 false chr5: 37880940-37881439 Medicago truncatula
Medtr5g087410 0.5kb downstream 0.5kb downstream 8554 true chr5: 37872386-37880939 Medicago truncatula
Medtr5g087410 0.5kb downstream 0.5kb downstream 500 false chr5: 37872386-37872885 Medicago truncatula
Medtr5g087410 1.0kb upstream 1.0kb upstream 9054 true chr5: 37872886-37881939 Medicago truncatula
Medtr5g087410 1.0kb upstream 1.0kb upstream 1000 false chr5: 37880940-37881939 Medicago truncatula
Medtr5g087410 1.0kb downstream 1.0kb downstream 9054 true chr5: 37871886-37880939 Medicago truncatula
Medtr5g087410 1.0kb downstream 1.0kb downstream 1000 false chr5: 37871886-37872885 Medicago truncatula
Medtr5g087410 2.0kb upstream 2.0kb upstream 10054 true chr5: 37872886-37882939 Medicago truncatula
Medtr5g087410 2.0kb upstream 2.0kb upstream 2000 false chr5: 37880940-37882939 Medicago truncatula
Medtr5g087410 2.0kb downstream 2.0kb downstream 10054 true chr5: 37870886-37880939 Medicago truncatula
Medtr5g087410 2.0kb downstream 2.0kb downstream 2000 false chr5: 37870886-37872885 Medicago truncatula
Medtr5g087410 5.0kb upstream 5.0kb upstream 13054 true chr5: 37872886-37885939 Medicago truncatula
Medtr5g087410 5.0kb upstream 5.0kb upstream 5000 false chr5: 37880940-37885939 Medicago truncatula
Medtr5g087410 5.0kb downstream 5.0kb downstream 13054 true chr5: 37867886-37880939 Medicago truncatula
Medtr5g087410 5.0kb downstream 5.0kb downstream 5000 false chr5: 37867886-37872885 Medicago truncatula
Medtr5g087410 10.0kb upstream 10.0kb upstream 18054 true chr5: 37872886-37890939 Medicago truncatula
Medtr5g087410 10.0kb upstream 10.0kb upstream 10000 false chr5: 37880940-37890939 Medicago truncatula
Medtr5g087410 10.0kb downstream 10.0kb downstream 18054 true chr5: 37862886-37880939 Medicago truncatula
Medtr5g087410 10.0kb downstream 10.0kb downstream 10000 false chr5: 37862886-37872885 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311295 5265 Fabidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.461        
cufflinks 0.738        
cufflinks 0.785        
cufflinks 0.126       Low
cufflinks 1.496       High
cufflinks 0.077     Low Low
cufflinks 0.309        
cufflinks 0.574        
cufflinks 0.476        

0 Strain