Gene : Medtr5g089280 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.5.2.2 - Dihydropyrimidinase / Hydantoinase Description:  dihydropyrimidinase
Genomic Order:  5071 Name:  ? Medtr5g089280
Secondary Identifier:  ? PAC:31085752
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3982 Medicago truncatula pathologic  
Mtruncatula PWY-6430 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g089280 0.5kb upstream 0.5kb upstream 5686 true chr5: 38794731-38800416 Medicago truncatula
Medtr5g089280 0.5kb upstream 0.5kb upstream 500 false chr5: 38794731-38795230 Medicago truncatula
Medtr5g089280 0.5kb downstream 0.5kb downstream 5686 true chr5: 38795231-38800916 Medicago truncatula
Medtr5g089280 0.5kb downstream 0.5kb downstream 500 false chr5: 38800417-38800916 Medicago truncatula
Medtr5g089280 1.0kb upstream 1.0kb upstream 6186 true chr5: 38794231-38800416 Medicago truncatula
Medtr5g089280 1.0kb upstream 1.0kb upstream 1000 false chr5: 38794231-38795230 Medicago truncatula
Medtr5g089280 1.0kb downstream 1.0kb downstream 6186 true chr5: 38795231-38801416 Medicago truncatula
Medtr5g089280 1.0kb downstream 1.0kb downstream 1000 false chr5: 38800417-38801416 Medicago truncatula
Medtr5g089280 2.0kb upstream 2.0kb upstream 7186 true chr5: 38793231-38800416 Medicago truncatula
Medtr5g089280 2.0kb upstream 2.0kb upstream 2000 false chr5: 38793231-38795230 Medicago truncatula
Medtr5g089280 2.0kb downstream 2.0kb downstream 7186 true chr5: 38795231-38802416 Medicago truncatula
Medtr5g089280 2.0kb downstream 2.0kb downstream 2000 false chr5: 38800417-38802416 Medicago truncatula
Medtr5g089280 5.0kb upstream 5.0kb upstream 10186 true chr5: 38790231-38800416 Medicago truncatula
Medtr5g089280 5.0kb upstream 5.0kb upstream 5000 false chr5: 38790231-38795230 Medicago truncatula
Medtr5g089280 5.0kb downstream 5.0kb downstream 10186 true chr5: 38795231-38805416 Medicago truncatula
Medtr5g089280 5.0kb downstream 5.0kb downstream 5000 false chr5: 38800417-38805416 Medicago truncatula
Medtr5g089280 10.0kb upstream 10.0kb upstream 15186 true chr5: 38785231-38800416 Medicago truncatula
Medtr5g089280 10.0kb upstream 10.0kb upstream 10000 false chr5: 38785231-38795230 Medicago truncatula
Medtr5g089280 10.0kb downstream 10.0kb downstream 15186 true chr5: 38795231-38810416 Medicago truncatula
Medtr5g089280 10.0kb downstream 10.0kb downstream 10000 false chr5: 38800417-38810416 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314312 5265 Fabidae View MSA
124064802 5270 Rosid View MSA
123752945 5271 Pentapetalae View MSA
122786753 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.626        
cufflinks 1.385        
cufflinks 2.091        
cufflinks 0.988       Low
cufflinks 1.763        
cufflinks 0.892       Low
cufflinks 2.021        
cufflinks 1.137        
cufflinks 3.175       High

0 Strain