Gene : Medtr5g089190 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2425 - Nuclear protein involved in cell morphogenesis and cell surface growth Description:  Las1 family protein, putative
Genomic Order:  5065 Name:  ? Medtr5g089190
Secondary Identifier:  ? PAC:31085115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g089190 0.5kb upstream 0.5kb upstream 5552 true chr5: 38762423-38767974 Medicago truncatula
Medtr5g089190 0.5kb upstream 0.5kb upstream 500 false chr5: 38767475-38767974 Medicago truncatula
Medtr5g089190 0.5kb downstream 0.5kb downstream 5552 true chr5: 38761923-38767474 Medicago truncatula
Medtr5g089190 0.5kb downstream 0.5kb downstream 500 false chr5: 38761923-38762422 Medicago truncatula
Medtr5g089190 1.0kb upstream 1.0kb upstream 6052 true chr5: 38762423-38768474 Medicago truncatula
Medtr5g089190 1.0kb upstream 1.0kb upstream 1000 false chr5: 38767475-38768474 Medicago truncatula
Medtr5g089190 1.0kb downstream 1.0kb downstream 6052 true chr5: 38761423-38767474 Medicago truncatula
Medtr5g089190 1.0kb downstream 1.0kb downstream 1000 false chr5: 38761423-38762422 Medicago truncatula
Medtr5g089190 2.0kb upstream 2.0kb upstream 7052 true chr5: 38762423-38769474 Medicago truncatula
Medtr5g089190 2.0kb upstream 2.0kb upstream 2000 false chr5: 38767475-38769474 Medicago truncatula
Medtr5g089190 2.0kb downstream 2.0kb downstream 7052 true chr5: 38760423-38767474 Medicago truncatula
Medtr5g089190 2.0kb downstream 2.0kb downstream 2000 false chr5: 38760423-38762422 Medicago truncatula
Medtr5g089190 5.0kb upstream 5.0kb upstream 10052 true chr5: 38762423-38772474 Medicago truncatula
Medtr5g089190 5.0kb upstream 5.0kb upstream 5000 false chr5: 38767475-38772474 Medicago truncatula
Medtr5g089190 5.0kb downstream 5.0kb downstream 10052 true chr5: 38757423-38767474 Medicago truncatula
Medtr5g089190 5.0kb downstream 5.0kb downstream 5000 false chr5: 38757423-38762422 Medicago truncatula
Medtr5g089190 10.0kb upstream 10.0kb upstream 15052 true chr5: 38762423-38777474 Medicago truncatula
Medtr5g089190 10.0kb upstream 10.0kb upstream 10000 false chr5: 38767475-38777474 Medicago truncatula
Medtr5g089190 10.0kb downstream 10.0kb downstream 15052 true chr5: 38752423-38767474 Medicago truncatula
Medtr5g089190 10.0kb downstream 10.0kb downstream 10000 false chr5: 38752423-38762422 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308260 5265 Fabidae View MSA
124060949 5270 Rosid View MSA
123737052 5271 Pentapetalae View MSA
122791609 5272 Eudicot View MSA
122045405 5273 Angiosperm View MSA
121348561 5274 Embryophyte View MSA
123425932 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.55        
cufflinks 1.165        
cufflinks 1.13        
cufflinks 0.392       Low
cufflinks 1.752       High
cufflinks 0.55        
cufflinks 0.478        
cufflinks 0.931        
cufflinks 0.734        

0 Strain