Gene : Medtr5g087710 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11695//PTHR11695:SF490 - ALCOHOL DEHYDROGENASE RELATED Description:  zinc-binding alcohol dehydrogenase family protein
Genomic Order:  4942 Name:  ? Medtr5g087710
Secondary Identifier:  ? PAC:31089024
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5486 Medicago truncatula pathologic  
Mtruncatula PWY-6313 Medicago truncatula pathologic  
Mtruncatula PWY-6333 Medicago truncatula pathologic  
Mtruncatula PWY66-21 Medicago truncatula pathologic  
Mtruncatula PWY66-389 Medicago truncatula pathologic  
Mtruncatula PWY-6802 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g087710 0.5kb upstream 0.5kb upstream 3880 true chr5: 38027254-38031133 Medicago truncatula
Medtr5g087710 0.5kb upstream 0.5kb upstream 500 false chr5: 38030634-38031133 Medicago truncatula
Medtr5g087710 0.5kb downstream 0.5kb downstream 3880 true chr5: 38026754-38030633 Medicago truncatula
Medtr5g087710 0.5kb downstream 0.5kb downstream 500 false chr5: 38026754-38027253 Medicago truncatula
Medtr5g087710 1.0kb upstream 1.0kb upstream 4380 true chr5: 38027254-38031633 Medicago truncatula
Medtr5g087710 1.0kb upstream 1.0kb upstream 1000 false chr5: 38030634-38031633 Medicago truncatula
Medtr5g087710 1.0kb downstream 1.0kb downstream 4380 true chr5: 38026254-38030633 Medicago truncatula
Medtr5g087710 1.0kb downstream 1.0kb downstream 1000 false chr5: 38026254-38027253 Medicago truncatula
Medtr5g087710 2.0kb upstream 2.0kb upstream 5380 true chr5: 38027254-38032633 Medicago truncatula
Medtr5g087710 2.0kb upstream 2.0kb upstream 2000 false chr5: 38030634-38032633 Medicago truncatula
Medtr5g087710 2.0kb downstream 2.0kb downstream 5380 true chr5: 38025254-38030633 Medicago truncatula
Medtr5g087710 2.0kb downstream 2.0kb downstream 2000 false chr5: 38025254-38027253 Medicago truncatula
Medtr5g087710 5.0kb upstream 5.0kb upstream 8380 true chr5: 38027254-38035633 Medicago truncatula
Medtr5g087710 5.0kb upstream 5.0kb upstream 5000 false chr5: 38030634-38035633 Medicago truncatula
Medtr5g087710 5.0kb downstream 5.0kb downstream 8380 true chr5: 38022254-38030633 Medicago truncatula
Medtr5g087710 5.0kb downstream 5.0kb downstream 5000 false chr5: 38022254-38027253 Medicago truncatula
Medtr5g087710 10.0kb upstream 10.0kb upstream 13380 true chr5: 38027254-38040633 Medicago truncatula
Medtr5g087710 10.0kb upstream 10.0kb upstream 10000 false chr5: 38030634-38040633 Medicago truncatula
Medtr5g087710 10.0kb downstream 10.0kb downstream 13380 true chr5: 38017254-38030633 Medicago truncatula
Medtr5g087710 10.0kb downstream 10.0kb downstream 10000 false chr5: 38017254-38027253 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310727 5265 Fabidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low Low
cufflinks 10.926     High  
cufflinks 23.591     High High
cufflinks 0.138        
cufflinks 21.739     High High
cufflinks 0.456        
cufflinks 0.037     Low  
cufflinks 15.509     High  
cufflinks 0.011     Low Low

0 Strain