Gene : Medtr5g091340 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF351 - GLYCOSYLTRANSFERASE Description:  sucrose-phosphate synthase family protein
Genomic Order:  5228 Name:  ? Medtr5g091340
Secondary Identifier:  ? PAC:31091546
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7238 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g091340 0.5kb upstream 0.5kb upstream 5584 true chr5: 39808572-39814155 Medicago truncatula
Medtr5g091340 0.5kb upstream 0.5kb upstream 500 false chr5: 39808572-39809071 Medicago truncatula
Medtr5g091340 0.5kb downstream 0.5kb downstream 5584 true chr5: 39809072-39814655 Medicago truncatula
Medtr5g091340 0.5kb downstream 0.5kb downstream 500 false chr5: 39814156-39814655 Medicago truncatula
Medtr5g091340 1.0kb upstream 1.0kb upstream 6084 true chr5: 39808072-39814155 Medicago truncatula
Medtr5g091340 1.0kb upstream 1.0kb upstream 1000 false chr5: 39808072-39809071 Medicago truncatula
Medtr5g091340 1.0kb downstream 1.0kb downstream 6084 true chr5: 39809072-39815155 Medicago truncatula
Medtr5g091340 1.0kb downstream 1.0kb downstream 1000 false chr5: 39814156-39815155 Medicago truncatula
Medtr5g091340 2.0kb upstream 2.0kb upstream 7084 true chr5: 39807072-39814155 Medicago truncatula
Medtr5g091340 2.0kb upstream 2.0kb upstream 2000 false chr5: 39807072-39809071 Medicago truncatula
Medtr5g091340 2.0kb downstream 2.0kb downstream 7084 true chr5: 39809072-39816155 Medicago truncatula
Medtr5g091340 2.0kb downstream 2.0kb downstream 2000 false chr5: 39814156-39816155 Medicago truncatula
Medtr5g091340 5.0kb upstream 5.0kb upstream 10084 true chr5: 39804072-39814155 Medicago truncatula
Medtr5g091340 5.0kb upstream 5.0kb upstream 5000 false chr5: 39804072-39809071 Medicago truncatula
Medtr5g091340 5.0kb downstream 5.0kb downstream 10084 true chr5: 39809072-39819155 Medicago truncatula
Medtr5g091340 5.0kb downstream 5.0kb downstream 5000 false chr5: 39814156-39819155 Medicago truncatula
Medtr5g091340 10.0kb upstream 10.0kb upstream 15084 true chr5: 39799072-39814155 Medicago truncatula
Medtr5g091340 10.0kb upstream 10.0kb upstream 10000 false chr5: 39799072-39809071 Medicago truncatula
Medtr5g091340 10.0kb downstream 10.0kb downstream 15084 true chr5: 39809072-39824155 Medicago truncatula
Medtr5g091340 10.0kb downstream 10.0kb downstream 10000 false chr5: 39814156-39824155 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297955 5265 Fabidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 16.886     High  
cufflinks 8.319        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.758     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.998     High  
cufflinks 0.007     Low Low

0 Strain