Gene : Medtr5g090010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Description:  fission 1 protein
Genomic Order:  5120 Name:  ? Medtr5g090010
Secondary Identifier:  ? PAC:31084959
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g090010 0.5kb upstream 0.5kb upstream 3938 true chr5: 39152019-39155956 Medicago truncatula
Medtr5g090010 0.5kb upstream 0.5kb upstream 500 false chr5: 39155457-39155956 Medicago truncatula
Medtr5g090010 0.5kb downstream 0.5kb downstream 3938 true chr5: 39151519-39155456 Medicago truncatula
Medtr5g090010 0.5kb downstream 0.5kb downstream 500 false chr5: 39151519-39152018 Medicago truncatula
Medtr5g090010 1.0kb upstream 1.0kb upstream 4438 true chr5: 39152019-39156456 Medicago truncatula
Medtr5g090010 1.0kb upstream 1.0kb upstream 1000 false chr5: 39155457-39156456 Medicago truncatula
Medtr5g090010 1.0kb downstream 1.0kb downstream 4438 true chr5: 39151019-39155456 Medicago truncatula
Medtr5g090010 1.0kb downstream 1.0kb downstream 1000 false chr5: 39151019-39152018 Medicago truncatula
Medtr5g090010 2.0kb upstream 2.0kb upstream 5438 true chr5: 39152019-39157456 Medicago truncatula
Medtr5g090010 2.0kb upstream 2.0kb upstream 2000 false chr5: 39155457-39157456 Medicago truncatula
Medtr5g090010 2.0kb downstream 2.0kb downstream 5438 true chr5: 39150019-39155456 Medicago truncatula
Medtr5g090010 2.0kb downstream 2.0kb downstream 2000 false chr5: 39150019-39152018 Medicago truncatula
Medtr5g090010 5.0kb upstream 5.0kb upstream 8438 true chr5: 39152019-39160456 Medicago truncatula
Medtr5g090010 5.0kb upstream 5.0kb upstream 5000 false chr5: 39155457-39160456 Medicago truncatula
Medtr5g090010 5.0kb downstream 5.0kb downstream 8438 true chr5: 39147019-39155456 Medicago truncatula
Medtr5g090010 5.0kb downstream 5.0kb downstream 5000 false chr5: 39147019-39152018 Medicago truncatula
Medtr5g090010 10.0kb upstream 10.0kb upstream 13438 true chr5: 39152019-39165456 Medicago truncatula
Medtr5g090010 10.0kb upstream 10.0kb upstream 10000 false chr5: 39155457-39165456 Medicago truncatula
Medtr5g090010 10.0kb downstream 10.0kb downstream 13438 true chr5: 39142019-39155456 Medicago truncatula
Medtr5g090010 10.0kb downstream 10.0kb downstream 10000 false chr5: 39142019-39152018 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297684 5265 Fabidae View MSA
124071938 5270 Rosid View MSA
123743204 5271 Pentapetalae View MSA
122793095 5272 Eudicot View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.3     High  
cufflinks 23.504     High  
cufflinks 30.627     High  
cufflinks 102.909     High  
cufflinks 21.826     High  
cufflinks 262.842     High High
cufflinks 55.359     High  
cufflinks 22.291     High  
cufflinks 61.617     High  

0 Strain