Gene : Medtr5g090070 M. truncatula Mt4.0v1
Defline:  (1 of 5) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Description:  serine-glyoxylate aminotransferase-like protein
Genomic Order:  5127 Name:  ? Medtr5g090070
Secondary Identifier:  ? PAC:31089148
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYSYN-ALA-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g090070 0.5kb upstream 0.5kb upstream 4353 true chr5: 39187132-39191484 Medicago truncatula
Medtr5g090070 0.5kb upstream 0.5kb upstream 500 false chr5: 39190985-39191484 Medicago truncatula
Medtr5g090070 0.5kb downstream 0.5kb downstream 4353 true chr5: 39186632-39190984 Medicago truncatula
Medtr5g090070 0.5kb downstream 0.5kb downstream 500 false chr5: 39186632-39187131 Medicago truncatula
Medtr5g090070 1.0kb upstream 1.0kb upstream 4853 true chr5: 39187132-39191984 Medicago truncatula
Medtr5g090070 1.0kb upstream 1.0kb upstream 1000 false chr5: 39190985-39191984 Medicago truncatula
Medtr5g090070 1.0kb downstream 1.0kb downstream 4853 true chr5: 39186132-39190984 Medicago truncatula
Medtr5g090070 1.0kb downstream 1.0kb downstream 1000 false chr5: 39186132-39187131 Medicago truncatula
Medtr5g090070 2.0kb upstream 2.0kb upstream 5853 true chr5: 39187132-39192984 Medicago truncatula
Medtr5g090070 2.0kb upstream 2.0kb upstream 2000 false chr5: 39190985-39192984 Medicago truncatula
Medtr5g090070 2.0kb downstream 2.0kb downstream 5853 true chr5: 39185132-39190984 Medicago truncatula
Medtr5g090070 2.0kb downstream 2.0kb downstream 2000 false chr5: 39185132-39187131 Medicago truncatula
Medtr5g090070 5.0kb upstream 5.0kb upstream 8853 true chr5: 39187132-39195984 Medicago truncatula
Medtr5g090070 5.0kb upstream 5.0kb upstream 5000 false chr5: 39190985-39195984 Medicago truncatula
Medtr5g090070 5.0kb downstream 5.0kb downstream 8853 true chr5: 39182132-39190984 Medicago truncatula
Medtr5g090070 5.0kb downstream 5.0kb downstream 5000 false chr5: 39182132-39187131 Medicago truncatula
Medtr5g090070 10.0kb upstream 10.0kb upstream 13853 true chr5: 39187132-39200984 Medicago truncatula
Medtr5g090070 10.0kb upstream 10.0kb upstream 10000 false chr5: 39190985-39200984 Medicago truncatula
Medtr5g090070 10.0kb downstream 10.0kb downstream 13853 true chr5: 39177132-39190984 Medicago truncatula
Medtr5g090070 10.0kb downstream 10.0kb downstream 10000 false chr5: 39177132-39187131 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301665 5265 Fabidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.852     High  
cufflinks 0.621       Low
cufflinks 20.245     High  
cufflinks 13.702     High  
cufflinks 0.118       Low
cufflinks 89.902     High High
cufflinks 96.046     High High
cufflinks 5.812        
cufflinks 12.545     High  

0 Strain