Gene : Medtr5g089900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22870:SF219 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN-RELATED Description:  regulator of chromosome condensation (RCC1) family protein
Genomic Order:  5112 Name:  ? Medtr5g089900
Secondary Identifier:  ? PAC:31090420
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g089900 0.5kb upstream 0.5kb upstream 9553 true chr5: 39104574-39114126 Medicago truncatula
Medtr5g089900 0.5kb upstream 0.5kb upstream 500 false chr5: 39104574-39105073 Medicago truncatula
Medtr5g089900 0.5kb downstream 0.5kb downstream 9553 true chr5: 39105074-39114626 Medicago truncatula
Medtr5g089900 0.5kb downstream 0.5kb downstream 500 false chr5: 39114127-39114626 Medicago truncatula
Medtr5g089900 1.0kb upstream 1.0kb upstream 10053 true chr5: 39104074-39114126 Medicago truncatula
Medtr5g089900 1.0kb upstream 1.0kb upstream 1000 false chr5: 39104074-39105073 Medicago truncatula
Medtr5g089900 1.0kb downstream 1.0kb downstream 10053 true chr5: 39105074-39115126 Medicago truncatula
Medtr5g089900 1.0kb downstream 1.0kb downstream 1000 false chr5: 39114127-39115126 Medicago truncatula
Medtr5g089900 2.0kb upstream 2.0kb upstream 11053 true chr5: 39103074-39114126 Medicago truncatula
Medtr5g089900 2.0kb upstream 2.0kb upstream 2000 false chr5: 39103074-39105073 Medicago truncatula
Medtr5g089900 2.0kb downstream 2.0kb downstream 11053 true chr5: 39105074-39116126 Medicago truncatula
Medtr5g089900 2.0kb downstream 2.0kb downstream 2000 false chr5: 39114127-39116126 Medicago truncatula
Medtr5g089900 5.0kb upstream 5.0kb upstream 14053 true chr5: 39100074-39114126 Medicago truncatula
Medtr5g089900 5.0kb upstream 5.0kb upstream 5000 false chr5: 39100074-39105073 Medicago truncatula
Medtr5g089900 5.0kb downstream 5.0kb downstream 14053 true chr5: 39105074-39119126 Medicago truncatula
Medtr5g089900 5.0kb downstream 5.0kb downstream 5000 false chr5: 39114127-39119126 Medicago truncatula
Medtr5g089900 10.0kb upstream 10.0kb upstream 19053 true chr5: 39095074-39114126 Medicago truncatula
Medtr5g089900 10.0kb upstream 10.0kb upstream 10000 false chr5: 39095074-39105073 Medicago truncatula
Medtr5g089900 10.0kb downstream 10.0kb downstream 19053 true chr5: 39105074-39124126 Medicago truncatula
Medtr5g089900 10.0kb downstream 10.0kb downstream 10000 false chr5: 39114127-39124126 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307659 5265 Fabidae View MSA
124062866 5270 Rosid View MSA
123743329 5271 Pentapetalae View MSA
122789808 5272 Eudicot View MSA
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.479        
cufflinks 2.836        
cufflinks 3.663       High
cufflinks 0.649       Low
cufflinks 3.514       High
cufflinks 0.604       Low
cufflinks 1.604        
cufflinks 2.955        
cufflinks 1.342        

0 Strain