Gene : Medtr5g090430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR18934:SF115 - NUCLEAR DEIH-BOXHELICASE-RELATED Description:  ATP-dependent RNA helicase, putative
Genomic Order:  5155 Name:  ? Medtr5g090430
Secondary Identifier:  ? PAC:31087895
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g090430 0.5kb upstream 0.5kb upstream 8564 true chr5: 39383956-39392519 Medicago truncatula
Medtr5g090430 0.5kb upstream 0.5kb upstream 500 false chr5: 39383956-39384455 Medicago truncatula
Medtr5g090430 0.5kb downstream 0.5kb downstream 8564 true chr5: 39384456-39393019 Medicago truncatula
Medtr5g090430 0.5kb downstream 0.5kb downstream 500 false chr5: 39392520-39393019 Medicago truncatula
Medtr5g090430 1.0kb upstream 1.0kb upstream 9064 true chr5: 39383456-39392519 Medicago truncatula
Medtr5g090430 1.0kb upstream 1.0kb upstream 1000 false chr5: 39383456-39384455 Medicago truncatula
Medtr5g090430 1.0kb downstream 1.0kb downstream 9064 true chr5: 39384456-39393519 Medicago truncatula
Medtr5g090430 1.0kb downstream 1.0kb downstream 1000 false chr5: 39392520-39393519 Medicago truncatula
Medtr5g090430 2.0kb upstream 2.0kb upstream 10064 true chr5: 39382456-39392519 Medicago truncatula
Medtr5g090430 2.0kb upstream 2.0kb upstream 2000 false chr5: 39382456-39384455 Medicago truncatula
Medtr5g090430 2.0kb downstream 2.0kb downstream 10064 true chr5: 39384456-39394519 Medicago truncatula
Medtr5g090430 2.0kb downstream 2.0kb downstream 2000 false chr5: 39392520-39394519 Medicago truncatula
Medtr5g090430 5.0kb upstream 5.0kb upstream 13064 true chr5: 39379456-39392519 Medicago truncatula
Medtr5g090430 5.0kb upstream 5.0kb upstream 5000 false chr5: 39379456-39384455 Medicago truncatula
Medtr5g090430 5.0kb downstream 5.0kb downstream 13064 true chr5: 39384456-39397519 Medicago truncatula
Medtr5g090430 5.0kb downstream 5.0kb downstream 5000 false chr5: 39392520-39397519 Medicago truncatula
Medtr5g090430 10.0kb upstream 10.0kb upstream 18064 true chr5: 39374456-39392519 Medicago truncatula
Medtr5g090430 10.0kb upstream 10.0kb upstream 10000 false chr5: 39374456-39384455 Medicago truncatula
Medtr5g090430 10.0kb downstream 10.0kb downstream 18064 true chr5: 39384456-39402519 Medicago truncatula
Medtr5g090430 10.0kb downstream 10.0kb downstream 10000 false chr5: 39392520-39402519 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304280 5265 Fabidae View MSA
124063294 5270 Rosid View MSA
123740544 5271 Pentapetalae View MSA
122791795 5272 Eudicot View MSA
122041609 5273 Angiosperm View MSA
121344795 5274 Embryophyte View MSA
123427408 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.749        
cufflinks 1.8        
cufflinks 2.362        
cufflinks 0.699       Low
cufflinks 3.006       High
cufflinks 0.585       Low
cufflinks 1.229        
cufflinks 1.992        
cufflinks 1.062        

0 Strain