Gene : Medtr5g090300 M. truncatula Mt4.0v1
Defline:  (1 of 5) 1.5.3.17 - Non-specific polyamine oxidase / Polyamine oxidase Description:  polyamine oxidase-like protein
Genomic Order:  5146 Name:  ? Medtr5g090300
Secondary Identifier:  ? PAC:31090419
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6441 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g090300 0.5kb upstream 0.5kb upstream 5636 true chr5: 39318340-39323975 Medicago truncatula
Medtr5g090300 0.5kb upstream 0.5kb upstream 500 false chr5: 39323476-39323975 Medicago truncatula
Medtr5g090300 0.5kb downstream 0.5kb downstream 5636 true chr5: 39317840-39323475 Medicago truncatula
Medtr5g090300 0.5kb downstream 0.5kb downstream 500 false chr5: 39317840-39318339 Medicago truncatula
Medtr5g090300 1.0kb upstream 1.0kb upstream 6136 true chr5: 39318340-39324475 Medicago truncatula
Medtr5g090300 1.0kb upstream 1.0kb upstream 1000 false chr5: 39323476-39324475 Medicago truncatula
Medtr5g090300 1.0kb downstream 1.0kb downstream 6136 true chr5: 39317340-39323475 Medicago truncatula
Medtr5g090300 1.0kb downstream 1.0kb downstream 1000 false chr5: 39317340-39318339 Medicago truncatula
Medtr5g090300 2.0kb upstream 2.0kb upstream 7136 true chr5: 39318340-39325475 Medicago truncatula
Medtr5g090300 2.0kb upstream 2.0kb upstream 2000 false chr5: 39323476-39325475 Medicago truncatula
Medtr5g090300 2.0kb downstream 2.0kb downstream 7136 true chr5: 39316340-39323475 Medicago truncatula
Medtr5g090300 2.0kb downstream 2.0kb downstream 2000 false chr5: 39316340-39318339 Medicago truncatula
Medtr5g090300 5.0kb upstream 5.0kb upstream 10136 true chr5: 39318340-39328475 Medicago truncatula
Medtr5g090300 5.0kb upstream 5.0kb upstream 5000 false chr5: 39323476-39328475 Medicago truncatula
Medtr5g090300 5.0kb downstream 5.0kb downstream 10136 true chr5: 39313340-39323475 Medicago truncatula
Medtr5g090300 5.0kb downstream 5.0kb downstream 5000 false chr5: 39313340-39318339 Medicago truncatula
Medtr5g090300 10.0kb upstream 10.0kb upstream 15136 true chr5: 39318340-39333475 Medicago truncatula
Medtr5g090300 10.0kb upstream 10.0kb upstream 10000 false chr5: 39323476-39333475 Medicago truncatula
Medtr5g090300 10.0kb downstream 10.0kb downstream 15136 true chr5: 39308340-39323475 Medicago truncatula
Medtr5g090300 10.0kb downstream 10.0kb downstream 10000 false chr5: 39308340-39318339 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310798 5265 Fabidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.106       Low
cufflinks 6.659        
cufflinks 6.934        
cufflinks 10.453     High High
cufflinks 7.177        
cufflinks 4.117       Low
cufflinks 7.881        
cufflinks 4.964        
cufflinks 10.731     High High

0 Strain